Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AL356057.3-201ENST00000402607 340 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 AL590556.1-201ENST00000423231 483 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 AL358176.2-201ENST00000425769 204 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS45Q9NRW7 AP000870.1-201ENST00000472927 406 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 AC107032.1-201ENST00000485945 480 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 AC132942.1-201ENST00000486753 483 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.73□□□□□ -1.97
VPS45Q9NRW7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS45Q9NRW7 AC027288.2-201ENST00000553028 243 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 RPS29P30-201ENST00000600975 111 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 AL356575.1-201ENST00000603008 283 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 AC005520.5-201ENST00000613926 164 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS45Q9NRW7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
VPS45Q9NRW7 RNU6-222P-201ENST00000362438 107 ntBASIC2.72□□□□□ -1.97
VPS45Q9NRW7 RNU4-50P-201ENST00000364361 141 ntBASIC2.72□□□□□ -1.97
VPS45Q9NRW7 SNORA63.7-201ENST00000365579 123 ntBASIC2.72□□□□□ -1.97
VPS45Q9NRW7 RNU1-139P-201ENST00000391307 165 ntBASIC2.72□□□□□ -1.97
VPS45Q9NRW7 MIR1252-201ENST00000408861 65 ntBASIC2.72□□□□□ -1.97
VPS45Q9NRW7 MTND3P2-201ENST00000438452 342 ntBASIC2.72□□□□□ -1.97
VPS45Q9NRW7 RNU6-1114P-201ENST00000516022 107 ntBASIC2.72□□□□□ -1.97
VPS45Q9NRW7 RNA5SP54-201ENST00000516951 92 ntBASIC2.72□□□□□ -1.97
VPS45Q9NRW7 AL442163.3-201ENST00000554110 156 ntBASIC2.72□□□□□ -1.97
VPS45Q9NRW7 AL117187.1-201ENST00000555482 181 ntBASIC2.72□□□□□ -1.97
VPS45Q9NRW7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS45Q9NRW7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS45Q9NRW7 AL355297.3-201ENST00000604082 446 ntBASIC2.72□□□□□ -1.97
VPS45Q9NRW7 AL355297.2-201ENST00000604792 129 ntBASIC2.72□□□□□ -1.97
VPS45Q9NRW7 AC010297.1-201ENST00000623948 149 ntBASIC2.72□□□□□ -1.97
VPS45Q9NRW7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.72□□□□□ -1.97
VPS45Q9NRW7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
VPS45Q9NRW7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS45Q9NRW7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VPS45Q9NRW7 Y_RNA.27-201ENST00000362540 103 ntBASIC2.71□□□□□ -1.98
VPS45Q9NRW7 Y_RNA.152-201ENST00000363578 100 ntBASIC2.71□□□□□ -1.98
VPS45Q9NRW7 Y_RNA.153-201ENST00000363615 91 ntBASIC2.71□□□□□ -1.98
VPS45Q9NRW7 SNORA51.11-201ENST00000384442 131 ntBASIC2.71□□□□□ -1.98
VPS45Q9NRW7 RNU6-1105P-201ENST00000384774 107 ntBASIC2.71□□□□□ -1.98
VPS45Q9NRW7 MIR208B-201ENST00000401172 77 ntBASIC2.71□□□□□ -1.98
VPS45Q9NRW7 SNORA3.2-201ENST00000408221 125 ntBASIC2.71□□□□□ -1.98
VPS45Q9NRW7 CBX3P6-201ENST00000430257 527 ntBASIC2.71□□□□□ -1.98
VPS45Q9NRW7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.71□□□□□ -1.98
VPS45Q9NRW7 U8.20-201ENST00000459445 131 ntBASIC2.71□□□□□ -1.98
VPS45Q9NRW7 Y_RNA.715-201ENST00000517082 110 ntBASIC2.71□□□□□ -1.98
VPS45Q9NRW7 RNU6-58P-201ENST00000517143 103 ntBASIC2.71□□□□□ -1.98
VPS45Q9NRW7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.71□□□□□ -1.98
VPS45Q9NRW7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS45Q9NRW7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS45Q9NRW7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS45Q9NRW7 CTSLP2-204ENST00000629029 392 ntBASIC2.71□□□□□ -1.98
VPS45Q9NRW7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VPS45Q9NRW7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS45Q9NRW7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS45Q9NRW7 RNU6-1309P-201ENST00000363305 108 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 Y_RNA.133-201ENST00000363428 110 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 Y_RNA.551-201ENST00000384661 102 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 RNU6-159P-201ENST00000391080 106 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 MIR548F4-201ENST00000408515 105 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 HMGB3P2-201ENST00000411913 584 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 DPH3P2-201ENST00000422618 250 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 EIF1P2-201ENST00000428233 350 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS45Q9NRW7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS45Q9NRW7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS45Q9NRW7 U8.22-201ENST00000459141 133 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 AC090515.1-201ENST00000465295 476 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.7□□□□□ -1.98
VPS45Q9NRW7 AC022868.1-201ENST00000517767 391 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 MIR4446-201ENST00000578505 67 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 MIR4635-201ENST00000583759 79 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 AL390123.1-201ENST00000603216 237 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS45Q9NRW7 AL021879.1-201ENST00000611756 288 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.7□□□□□ -1.98
VPS45Q9NRW7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS45Q9NRW7 RNU4-15P-201ENST00000362613 141 ntBASIC2.69□□□□□ -1.98
VPS45Q9NRW7 RNY3P4-201ENST00000384428 101 ntBASIC2.69□□□□□ -1.98
VPS45Q9NRW7 RNU6-1093P-201ENST00000391194 107 ntBASIC2.69□□□□□ -1.98
VPS45Q9NRW7 RNA5SP201-201ENST00000410316 124 ntBASIC2.69□□□□□ -1.98
VPS45Q9NRW7 AC007064.1-201ENST00000412238 351 ntBASIC2.69□□□□□ -1.98
VPS45Q9NRW7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS45Q9NRW7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS45Q9NRW7 AC007215.1-201ENST00000464893 276 ntBASIC2.69□□□□□ -1.98
VPS45Q9NRW7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS45Q9NRW7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS45Q9NRW7 RNU1-104P-201ENST00000517280 175 ntBASIC2.69□□□□□ -1.98
VPS45Q9NRW7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS45Q9NRW7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS45Q9NRW7 AC069528.2-201ENST00000624849 1991 ntBASIC2.69□□□□□ -1.98
VPS45Q9NRW7 RNU1-76P-201ENST00000362903 159 ntBASIC2.68□□□□□ -1.98
VPS45Q9NRW7 RNU5F-3P-201ENST00000363767 117 ntBASIC2.68□□□□□ -1.98
VPS45Q9NRW7 RNU6-280P-201ENST00000364145 104 ntBASIC2.68□□□□□ -1.98
VPS45Q9NRW7 DEFA7P-201ENST00000382676 285 ntBASIC2.68□□□□□ -1.98
VPS45Q9NRW7 MIR487A-201ENST00000385009 80 ntBASIC2.68□□□□□ -1.98
VPS45Q9NRW7 MIR10B-201ENST00000385011 110 ntBASIC2.68□□□□□ -1.98
VPS45Q9NRW7 RNA5SP213-201ENST00000391031 106 ntBASIC2.68□□□□□ -1.98
VPS45Q9NRW7 WARS2P1-201ENST00000429678 537 ntBASIC2.68□□□□□ -1.98
VPS45Q9NRW7 AC009238.1-201ENST00000442165 424 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms