Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 AC060773.1-201ENST00000421698 310 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 AC074290.1-201ENST00000448883 135 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 HMGN2P23-201ENST00000456759 269 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 AC092989.1-201ENST00000481235 277 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 AC011406.1-201ENST00000512440 370 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 RNU6-718P-201ENST00000516166 105 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 RNU6-948P-201ENST00000516374 107 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 RNU6-344P-201ENST00000516635 111 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 AC068137.4-201ENST00000638485 296 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 RNU1-96P-201ENST00000364163 162 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 RNU6-1305P-201ENST00000364353 104 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 Y_RNA.319-201ENST00000365138 92 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 MIR153-2-201ENST00000385225 87 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 MIR320A-201ENST00000385302 82 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AL117342.1-201ENST00000404861 406 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AC245047.4-201ENST00000433189 144 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 MTATP6P13-201ENST00000438531 667 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AC016717.1-201ENST00000448918 286 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 MTND1P17-201ENST00000448961 204 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 snoU13.30-201ENST00000458951 104 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 UBL5P3-201ENST00000475112 231 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AC025465.3-201ENST00000510570 311 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AC011352.1-201ENST00000512300 793 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 RNU6-1088P-201ENST00000516850 104 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 RNU6-1198P-201ENST00000516904 67 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 RNA5SP454-201ENST00000517231 127 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 DEFB122-202ENST00000569013 197 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AC013412.1-201ENST00000610687 192 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AC093913.1-201ENST00000614178 329 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AL078596.1-201ENST00000624856 447 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AC073869.6-201ENST00000640656 341 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 AP000648.3-201ENST00000623539 4507 ntBASIC1.27□□□□□ -2.21
CCL28Q9NRJ3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 Y_RNA.111-201ENST00000363248 100 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 RNU6-596P-201ENST00000365395 98 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 SNORA70B-201ENST00000384210 135 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 SNORA67.2-201ENST00000384300 149 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 Y_RNA.500-201ENST00000384466 111 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 MIR520A-201ENST00000384862 85 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 MIR504-201ENST00000385065 83 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 U8.13-201ENST00000390842 128 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 AL627390.1-201ENST00000396055 340 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 FO393415.2-201ENST00000480085 343 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 RPL30P10-201ENST00000488148 337 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 RNA5SP384-201ENST00000516615 116 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 RNU6-566P-201ENST00000516790 107 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 RNU6-58P-201ENST00000517143 103 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 AC027288.2-201ENST00000553028 243 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 MIR5696-201ENST00000578474 85 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 MIR6845-201ENST00000613182 61 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 MIR8074-201ENST00000615081 81 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 AC139792.2-201ENST00000624218 587 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 AC068205.3-201ENST00000636385 468 ntBASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CCL28Q9NRJ3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 MIR424-201ENST00000362227 98 ntBASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 RNU6-137P-201ENST00000363680 108 ntBASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 MIR934-201ENST00000401241 83 ntBASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 EBAG9P1-201ENST00000418955 543 ntBASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 AC243428.1-201ENST00000421099 264 ntBASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 AL139396.1-201ENST00000421137 167 ntBASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 RPL31P63-201ENST00000422565 375 ntBASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 CST2P1-201ENST00000425770 87 ntBASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 AC027575.1-201ENST00000481064 460 ntBASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 RNU4-49P-201ENST00000516080 140 ntBASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 RNU1-117P-201ENST00000517041 158 ntBASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 RNU1-54P-201ENST00000517181 120 ntBASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 AC018638.8-201ENST00000588755 281 ntBASIC1.25□□□□□ -2.21
CCL28Q9NRJ3 7SK.7-201ENST00000603504 247 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms