Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 RPL30P10-201ENST00000488148 337 ntBASIC1.56□□□□□ -2.16
EXOSC3Q9NQT5 HMGB3P17-201ENST00000504195 649 ntBASIC1.56□□□□□ -2.16
EXOSC3Q9NQT5 RNU6-250P-201ENST00000516958 103 ntBASIC1.56□□□□□ -2.16
EXOSC3Q9NQT5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.56□□□□□ -2.16
EXOSC3Q9NQT5 DEFB122-202ENST00000569013 197 ntBASIC1.56□□□□□ -2.16
EXOSC3Q9NQT5 MIR6845-201ENST00000613182 61 ntBASIC1.56□□□□□ -2.16
EXOSC3Q9NQT5 AC083806.3-201ENST00000614016 455 ntBASIC1.56□□□□□ -2.16
EXOSC3Q9NQT5 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.56□□□□□ -2.16
EXOSC3Q9NQT5 AC137590.2-201ENST00000619709 240 ntBASIC1.56□□□□□ -2.16
EXOSC3Q9NQT5 MTND4P5-201ENST00000435821 1374 ntBASIC1.56□□□□□ -2.16
EXOSC3Q9NQT5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 Y_RNA.160-201ENST00000363677 92 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 RNU6-876P-201ENST00000391295 104 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 RNU6-174P-201ENST00000410406 106 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 RPS20P15-201ENST00000412792 311 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 RPL31P63-201ENST00000422565 375 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 AC009237.7-201ENST00000447357 229 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 AC016717.1-201ENST00000448918 286 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 AC007395.1-201ENST00000451333 677 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 RNU1-131P-201ENST00000458943 161 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 snoU13.15-201ENST00000459407 104 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 RPL23AP42-201ENST00000471152 471 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 AC097473.1-201ENST00000508142 408 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 AC116337.1-201ENST00000509680 687 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 AP003033.1-201ENST00000527244 415 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 RRN3P3-201ENST00000549207 578 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 MIR4753-201ENST00000585119 83 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 SNRPGP20-201ENST00000604477 205 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 AL627230.6-201ENST00000611129 280 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 AC122108.2-201ENST00000611946 526 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 RMST_6.1-201ENST00000611980 203 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 AC008555.8-201ENST00000623602 2168 ntBASIC1.55□□□□□ -2.16
EXOSC3Q9NQT5 AL159152.1-201ENST00000635019 2587 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 SNORA48.1-201ENST00000390879 135 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 SNORA26.9-201ENST00000391322 122 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 AC243428.1-201ENST00000421099 264 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 OOSP1P1-201ENST00000423265 274 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 MTCO3P46-201ENST00000425787 232 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 MTND1P2-201ENST00000430604 821 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 MTCO3P29-201ENST00000432119 779 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 RPS3AP52-201ENST00000435639 297 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 snoU13.30-201ENST00000458951 104 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 RN7SL429P-201ENST00000479090 223 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 RN7SL489P-201ENST00000486185 223 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 RN7SL327P-201ENST00000488659 223 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 RNU6-295P-201ENST00000516901 104 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 RNU1-117P-201ENST00000517041 158 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 MIR5696-201ENST00000578474 85 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 AC005034.5-201ENST00000604219 466 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 RN7SL853P-201ENST00000617250 223 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 U1.36-201ENST00000620684 176 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 BX322639.1-202ENST00000423987 2213 ntBASIC1.54□□□□□ -2.16
EXOSC3Q9NQT5 AL356292.1-201ENST00000283110 373 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 Y_RNA.72-201ENST00000362894 103 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 Y_RNA.184-201ENST00000363884 108 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 RNU6-1305P-201ENST00000364353 104 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 Y_RNA.319-201ENST00000365138 92 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 MIR300-201ENST00000401138 83 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 MIR548K-201ENST00000408406 116 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 MRPS17P9-201ENST00000511924 393 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 RNU7-30P-201ENST00000516835 62 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 RNU6-58P-201ENST00000517143 103 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 CBX3P8-201ENST00000532412 525 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 AC027288.2-201ENST00000553028 243 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 UBL5P4-201ENST00000562584 236 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 MIR5094-201ENST00000578766 85 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 AC005786.1-201ENST00000588553 154 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 AL109918.3-201ENST00000603072 338 ntBASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.53□□□□□ -2.16
EXOSC3Q9NQT5 SNORD115-32-201ENST00000364079 82 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-596P-201ENST00000365395 98 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 Y_RNA.405-201ENST00000383979 100 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-767P-201ENST00000384132 107 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 Y_RNA.451-201ENST00000384200 100 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 Y_RNA.524-201ENST00000384564 100 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 Y_RNA.561-201ENST00000384694 100 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-541P-201ENST00000384709 110 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 MIR153-2-201ENST00000385225 87 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 MT-TL1-201ENST00000386347 75 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 RNA5SP212-201ENST00000391223 107 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 AC007677.1-201ENST00000445757 515 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 SNORD5.1-201ENST00000458800 75 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms