Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 SNORD115-8-201ENST00000363856 82 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.813-201ENST00000364639 102 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 SNORD115-38-201ENST00000365037 82 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.395-201ENST00000383945 109 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.405-201ENST00000383979 100 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.451-201ENST00000384200 100 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.463-201ENST00000384271 102 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.524-201ENST00000384564 100 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.561-201ENST00000384694 100 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 SNORA26.9-201ENST00000391322 122 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 MIR320B2-201ENST00000408479 138 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.38□□□□□ -2.03
DDX4Q9NQI0 CR769767.1-201ENST00000436337 346 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 Z82188.1-201ENST00000436709 154 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.38□□□□□ -2.03
DDX4Q9NQI0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.38□□□□□ -2.03
DDX4Q9NQI0 snoU13.6-201ENST00000458785 104 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 MIR2053-201ENST00000459295 91 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.38□□□□□ -2.03
DDX4Q9NQI0 AC132942.1-201ENST00000486753 483 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.38□□□□□ -2.03
DDX4Q9NQI0 IGLV3-17-201ENST00000519099 244 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 AC026470.2-201ENST00000561492 181 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 MIR4719-201ENST00000585233 84 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 RPL17P51-201ENST00000605218 238 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.38□□□□□ -2.03
DDX4Q9NQI0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.38□□□□□ -2.03
DDX4Q9NQI0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
DDX4Q9NQI0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
DDX4Q9NQI0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.37□□□□□ -2.03
DDX4Q9NQI0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.37□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.112-201ENST00000363250 102 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.252-201ENST00000364556 101 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 RNU6-99P-201ENST00000364721 107 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.428-201ENST00000384078 102 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 U8.10-201ENST00000384260 133 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 RNU6-1274P-201ENST00000384557 107 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 RNU6-541P-201ENST00000384709 110 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 SNORA80E-201ENST00000384744 137 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 RNA5SP213-201ENST00000391031 106 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 RNU6-1093P-201ENST00000391194 107 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 SNORD23.1-201ENST00000408212 104 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 MTCO2P12-201ENST00000427426 682 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 MTCO3P29-201ENST00000432119 779 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 AC007215.1-201ENST00000464893 276 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.37□□□□□ -2.03
DDX4Q9NQI0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.37□□□□□ -2.03
DDX4Q9NQI0 AC091144.1-201ENST00000519573 138 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.37□□□□□ -2.03
DDX4Q9NQI0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
DDX4Q9NQI0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.37□□□□□ -2.03
DDX4Q9NQI0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.37□□□□□ -2.03
DDX4Q9NQI0 U4atac.1-201ENST00000618345 95 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 AL353997.5-201ENST00000618886 171 ntBASIC2.37□□□□□ -2.03
DDX4Q9NQI0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.319-201ENST00000365138 92 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 RNU6-378P-201ENST00000384324 107 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 MIR190B-201ENST00000401119 79 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 MIR1302-11-201ENST00000408051 138 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 MIR1302-9-201ENST00000408365 138 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 MIR1302-10-201ENST00000408734 138 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 RNU6-1156P-201ENST00000410365 100 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.597-201ENST00000410463 100 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.36□□□□□ -2.03
DDX4Q9NQI0 AC092423.1-201ENST00000430165 186 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 AC003989.2-201ENST00000440224 169 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.36□□□□□ -2.03
DDX4Q9NQI0 AC090515.1-201ENST00000465295 476 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.36□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.701-201ENST00000516812 110 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 RNU6-548P-201ENST00000517083 115 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 SNORD116.3-201ENST00000517176 78 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 AC144568.1-201ENST00000520139 137 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 AC023442.1-201ENST00000531247 422 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 AC121758.2-201ENST00000553271 193 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.36□□□□□ -2.03
DDX4Q9NQI0 AC044792.1-201ENST00000593294 196 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 AL355297.2-201ENST00000604792 129 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 MIR1302-2-201ENST00000607096 138 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 AL355802.3-201ENST00000607571 545 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 AC134503.1-201ENST00000633048 54 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.36□□□□□ -2.03
DDX4Q9NQI0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
DDX4Q9NQI0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.36□□□□□ -2.03
DDX4Q9NQI0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
DDX4Q9NQI0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
DDX4Q9NQI0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.35□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.128-201ENST00000363391 112 ntBASIC2.35□□□□□ -2.03
DDX4Q9NQI0 SNORD32B-201ENST00000364460 84 ntBASIC2.35□□□□□ -2.03
DDX4Q9NQI0 RNU1-115P-201ENST00000365329 160 ntBASIC2.35□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.364-201ENST00000365532 101 ntBASIC2.35□□□□□ -2.03
DDX4Q9NQI0 RNU6-1032P-201ENST00000384100 107 ntBASIC2.35□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.445-201ENST00000384168 102 ntBASIC2.35□□□□□ -2.03
DDX4Q9NQI0 MTND1P14-201ENST00000427400 950 ntBASIC2.35□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.631-201ENST00000459607 101 ntBASIC2.35□□□□□ -2.03
DDX4Q9NQI0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX4Q9NQI0 RNU6-699P-201ENST00000517081 110 ntBASIC2.35□□□□□ -2.03
DDX4Q9NQI0 RNA5SP402-201ENST00000517148 110 ntBASIC2.35□□□□□ -2.03
DDX4Q9NQI0 MIR2355-201ENST00000517199 87 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms