Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RPL23AP50-201ENST00000434149 455 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AC016700.2-201ENST00000446011 156 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 TOMM22P6-201ENST00000465035 409 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AC015911.1-201ENST00000495111 156 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.27□□□□□ -2.05
UPF2Q9HAU5 RNU6-307P-201ENST00000516743 106 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AC016256.1-201ENST00000547971 354 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AC104581.2-201ENST00000572227 430 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 MIR1273D-201ENST00000577266 86 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AC073410.2-201ENST00000603240 332 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.27□□□□□ -2.05
UPF2Q9HAU5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
UPF2Q9HAU5 ZNF72P-201ENST00000425869 1908 ntBASIC2.27□□□□□ -2.05
UPF2Q9HAU5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
UPF2Q9HAU5 AC092268.1-201ENST00000342691 405 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 RNU6-222P-201ENST00000362438 107 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 SNORA3A-201ENST00000364113 130 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 SNORA63C-201ENST00000364578 129 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 SNORA16B-201ENST00000364674 135 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 RNU4-42P-201ENST00000364738 142 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 RNU6-17P-201ENST00000384245 107 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 RNU6-18P-201ENST00000384527 107 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 SNORA64-201ENST00000384674 134 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 MIR549A-201ENST00000385268 96 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 AC138623.1-201ENST00000418060 216 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.26□□□□□ -2.05
UPF2Q9HAU5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.26□□□□□ -2.05
UPF2Q9HAU5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.26□□□□□ -2.05
UPF2Q9HAU5 AL353705.4-201ENST00000449661 238 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 CKS1BP2-201ENST00000497342 240 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 CYCSP26-201ENST00000534107 320 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 AC027288.2-201ENST00000553028 243 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 AC091544.4-201ENST00000555268 342 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.26□□□□□ -2.05
UPF2Q9HAU5 MIR3618-201ENST00000580330 88 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.26□□□□□ -2.05
UPF2Q9HAU5 AC092447.9-201ENST00000603395 144 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 AC006157.1-201ENST00000611750 366 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 AC007792.1-201ENST00000623023 402 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 MIR4272-201ENST00000635924 64 ntBASIC2.26□□□□□ -2.05
UPF2Q9HAU5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
UPF2Q9HAU5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
UPF2Q9HAU5 RNU6-1210P-201ENST00000363775 107 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 SNORD115-32-201ENST00000364079 82 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 RNU4-9P-201ENST00000364951 139 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 RNU1-115P-201ENST00000365329 160 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 RNU2-63P-201ENST00000410792 194 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 AC003685.2-201ENST00000422795 395 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 AL118496.2-201ENST00000448300 230 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 AC012308.1-201ENST00000451232 178 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 snoU13.30-201ENST00000458951 104 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 RNU2-53P-201ENST00000516257 147 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 RNU2-44P-201ENST00000516795 194 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
UPF2Q9HAU5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.25□□□□□ -2.05
UPF2Q9HAU5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.25□□□□□ -2.05
UPF2Q9HAU5 AC021231.3-201ENST00000558497 370 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.25□□□□□ -2.05
UPF2Q9HAU5 MIR4419B-201ENST00000577260 68 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.25□□□□□ -2.05
UPF2Q9HAU5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.25□□□□□ -2.05
UPF2Q9HAU5 AL713866.2-201ENST00000603579 219 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 AL034555.1-201ENST00000604816 211 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 AC016925.2-201ENST00000605108 242 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 SNORD14A-201ENST00000606526 91 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 AC096772.1-201ENST00000609146 564 ntBASIC2.25□□□□□ -2.05
UPF2Q9HAU5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.25□□□□□ -2.05
UPF2Q9HAU5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
UPF2Q9HAU5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.24□□□□□ -2.05
UPF2Q9HAU5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
UPF2Q9HAU5 RNU6-655P-201ENST00000362858 107 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 RNU6-708P-201ENST00000384217 107 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 RNU6-378P-201ENST00000384324 107 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 SNORA67.3-201ENST00000384366 140 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 MIR32-201ENST00000384965 70 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 MIR190B-201ENST00000401119 79 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 CBX3P9-201ENST00000402326 552 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 SNORD23.1-201ENST00000408212 104 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 AC113618.1-201ENST00000416747 285 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 AC012306.1-201ENST00000423267 114 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 MTCYBP10-201ENST00000424905 650 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.24□□□□□ -2.05
UPF2Q9HAU5 AC092423.1-201ENST00000430165 186 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.24□□□□□ -2.05
UPF2Q9HAU5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.24□□□□□ -2.05
UPF2Q9HAU5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.24□□□□□ -2.05
UPF2Q9HAU5 RN7SKP210-201ENST00000459176 261 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 RNU6-264P-201ENST00000517134 104 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 SNORD116.3-201ENST00000517176 78 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 MIR4680-201ENST00000580906 66 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 AC104695.3-201ENST00000604052 296 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 AC005520.5-201ENST00000613926 164 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 AC064859.1-201ENST00000624741 174 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 AC091812.1-201ENST00000432235 1948 ntBASIC2.24□□□□□ -2.05
UPF2Q9HAU5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
UPF2Q9HAU5 snoU2_19.1-201ENST00000362361 80 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms