Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.37□□□□□ -1.87
BCAS3Q9H6U6 AC004467.1-201ENST00000615678 330 ntBASIC3.37□□□□□ -1.87
BCAS3Q9H6U6 MIR6715A-201ENST00000615929 79 ntBASIC3.37□□□□□ -1.87
BCAS3Q9H6U6 MIR3199-2-201ENST00000636243 86 ntBASIC3.37□□□□□ -1.87
BCAS3Q9H6U6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.37□□□□□ -1.87
BCAS3Q9H6U6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.37□□□□□ -1.87
BCAS3Q9H6U6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 AC092593.1-201ENST00000515413 1815 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 MIR148B-201ENST00000362252 99 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 RNU6-1010P-201ENST00000362757 107 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 RNU4-80P-201ENST00000363200 141 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 Y_RNA.121-201ENST00000363309 113 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 RNA5SP126-201ENST00000365092 109 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 Y_RNA.398-201ENST00000383952 99 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 MIR320B2-201ENST00000408479 138 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 RNA5SP201-201ENST00000410316 124 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 AL714022.1-201ENST00000439897 151 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 AC005840.1-201ENST00000498412 377 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 RNU6-346P-201ENST00000516288 111 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 SUMO2P18-201ENST00000518873 252 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 MIR5047-201ENST00000579212 100 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 SNRPGP20-201ENST00000604477 205 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 HSPE1P7-201ENST00000604681 321 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 AL078604.3-201ENST00000615580 211 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 AC091932.3-201ENST00000624223 323 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 MTND1P7-201ENST00000632801 297 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 SNORD98-201ENST00000636377 67 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 MIR3674-201ENST00000636576 68 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 AC010680.1-201ENST00000590024 3590 ntBASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
BCAS3Q9H6U6 AC000403.1-201ENST00000613696 3585 ntBASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 AL031121.1-201ENST00000406553 254 ntBASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 AL357139.1-201ENST00000407792 426 ntBASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 AC006539.3-201ENST00000454258 129 ntBASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 RPS4XP13-201ENST00000483219 789 ntBASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 AC091826.1-201ENST00000514065 313 ntBASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 RNU5F-2P-201ENST00000516066 82 ntBASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 RNU2-12P-201ENST00000517216 168 ntBASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 AP002001.1-203ENST00000534002 267 ntBASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 MIR3923-201ENST00000579521 83 ntBASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 MIR4672-201ENST00000583126 81 ntBASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 AC091152.3-201ENST00000604227 325 ntBASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 AC073308.1-201ENST00000623696 305 ntBASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 PWAR6-201ENST00000552334 4618 ntBASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
BCAS3Q9H6U6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 RNU6-312P-201ENST00000364629 107 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 RNU4-56P-201ENST00000364700 142 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 RNU6-1264P-201ENST00000383891 107 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 RNU6-1081P-201ENST00000384537 107 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 Y_RNA.571-201ENST00000384753 98 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 HSPE1P26-201ENST00000405341 275 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 RNU5E-9P-201ENST00000411164 104 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 AC023141.4-201ENST00000412031 328 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 AC096649.2-201ENST00000416186 393 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 AC022018.1-201ENST00000430685 241 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 AC108938.1-201ENST00000451204 136 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 RNA5SP310-201ENST00000459084 116 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 RPL23AP62-201ENST00000463396 453 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 AC140059.1-201ENST00000489238 361 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 AC079600.2-201ENST00000550076 130 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 HMGN2P15-201ENST00000585707 270 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 AL008718.3-201ENST00000610217 321 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 AL138880.2-201ENST00000616214 239 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 MIR6076-201ENST00000617521 113 ntBASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
BCAS3Q9H6U6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
BCAS3Q9H6U6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 Y_RNA.23-201ENST00000362496 106 ntBASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 Y_RNA.75-201ENST00000362927 97 ntBASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 Y_RNA.272-201ENST00000364696 102 ntBASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 EI24P2-201ENST00000397776 1076 ntBASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 PTGES3P4-201ENST00000426243 356 ntBASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 ARF4P2-201ENST00000430209 526 ntBASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 RNU6-344P-201ENST00000516635 111 ntBASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 AC013412.1-201ENST00000610687 192 ntBASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 AC104465.1-201ENST00000611365 139 ntBASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 AC068831.7-201ENST00000616954 363 ntBASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms