Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MIR5696-201ENST00000578474 85 ntBASIC1.81□□□□□ -2.12
UBQLN3Q9H347 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.81□□□□□ -2.12
UBQLN3Q9H347 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.81□□□□□ -2.12
UBQLN3Q9H347 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.81□□□□□ -2.12
UBQLN3Q9H347 ZNF299P-201ENST00000406845 1804 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 MIR340-201ENST00000362125 95 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 Y_RNA.2-201ENST00000362330 96 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 RNU6-845P-201ENST00000362578 103 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 Y_RNA.319-201ENST00000365138 92 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 RNU6-601P-201ENST00000384540 107 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 MIR504-201ENST00000385065 83 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 MIR1283-1-201ENST00000408494 87 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 AC004866.1-201ENST00000411748 78 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 AC243428.1-201ENST00000421099 264 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
UBQLN3Q9H347 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.8□□□□□ -2.12
UBQLN3Q9H347 AC009237.7-201ENST00000447357 229 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.8□□□□□ -2.12
UBQLN3Q9H347 RNU1-131P-201ENST00000458943 161 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 AC026782.1-201ENST00000512952 449 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 RNU7-175P-201ENST00000515915 61 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 RNU6-1198P-201ENST00000516904 67 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 RNA5SP54-201ENST00000516951 92 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 RNU6-58P-201ENST00000517143 103 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.8□□□□□ -2.12
UBQLN3Q9H347 MIR5089-201ENST00000580047 84 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 AC011494.1-201ENST00000596454 237 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 AC018462.2-201ENST00000605375 395 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 MIR6715A-201ENST00000615929 79 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 AL359697.1-201ENST00000624879 587 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 BX322639.1-202ENST00000423987 2213 ntBASIC1.8□□□□□ -2.12
UBQLN3Q9H347 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.8□□□□□ -2.12
UBQLN3Q9H347 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
UBQLN3Q9H347 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.79□□□□□ -2.12
UBQLN3Q9H347 AL159152.1-201ENST00000635019 2587 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 SNORD115-32-201ENST00000364079 82 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 RNU6-1305P-201ENST00000364353 104 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 Y_RNA.279-201ENST00000364763 95 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.79□□□□□ -2.12
UBQLN3Q9H347 Y_RNA.405-201ENST00000383979 100 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 Y_RNA.451-201ENST00000384200 100 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 Y_RNA.524-201ENST00000384564 100 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 Y_RNA.561-201ENST00000384694 100 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 U8.13-201ENST00000390842 128 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 RNU6-1050P-201ENST00000410388 107 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 RPL21P111-201ENST00000418453 477 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 HMGB1P18-201ENST00000438801 619 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.79□□□□□ -2.12
UBQLN3Q9H347 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.79□□□□□ -2.12
UBQLN3Q9H347 AC010531.2-201ENST00000465012 153 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 AC103851.1-201ENST00000506833 274 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.79□□□□□ -2.12
UBQLN3Q9H347 AL590705.4-201ENST00000532209 134 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 CBX3P8-201ENST00000532412 525 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 AC104984.5-201ENST00000586878 94 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.79□□□□□ -2.12
UBQLN3Q9H347 AC083806.3-201ENST00000614016 455 ntBASIC1.79□□□□□ -2.12
UBQLN3Q9H347 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.79□□□□□ -2.12
UBQLN3Q9H347 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
UBQLN3Q9H347 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
UBQLN3Q9H347 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
UBQLN3Q9H347 Y_RNA.184-201ENST00000363884 108 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 FGF7P8-201ENST00000402994 292 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 AL033519.2-201ENST00000403958 392 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 Y_RNA.594-201ENST00000410373 140 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 RNA5SP489-201ENST00000410986 109 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.78□□□□□ -2.12
UBQLN3Q9H347 MTCO3P29-201ENST00000432119 779 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 MTCO1P44-201ENST00000441935 243 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.78□□□□□ -2.12
UBQLN3Q9H347 RN7SKP210-201ENST00000459176 261 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 RN7SL274P-201ENST00000492268 272 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 PRDX4P1-201ENST00000507189 574 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 AC097473.1-201ENST00000508142 408 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.78□□□□□ -2.12
UBQLN3Q9H347 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.78□□□□□ -2.12
UBQLN3Q9H347 RNVU1-2-201ENST00000516326 135 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 SNORA25.14-201ENST00000516481 132 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 RNU1-117P-201ENST00000517041 158 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
UBQLN3Q9H347 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.78□□□□□ -2.12
UBQLN3Q9H347 MIR4713-201ENST00000582691 75 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 AC009229.3-201ENST00000608056 282 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 uc_338.5-201ENST00000611839 155 ntBASIC1.78□□□□□ -2.12
UBQLN3Q9H347 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
UBQLN3Q9H347 Y_RNA.88-201ENST00000363029 99 ntBASIC1.77□□□□□ -2.13
UBQLN3Q9H347 RNU6-595P-201ENST00000363944 107 ntBASIC1.77□□□□□ -2.13
UBQLN3Q9H347 RNU6-593P-201ENST00000364716 112 ntBASIC1.77□□□□□ -2.13
UBQLN3Q9H347 Y_RNA.339-201ENST00000365325 102 ntBASIC1.77□□□□□ -2.13
UBQLN3Q9H347 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.77□□□□□ -2.13
UBQLN3Q9H347 AC016717.1-201ENST00000448918 286 ntBASIC1.77□□□□□ -2.13
UBQLN3Q9H347 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.77□□□□□ -2.13
UBQLN3Q9H347 AC114982.1-201ENST00000469402 321 ntBASIC1.77□□□□□ -2.13
UBQLN3Q9H347 RNA5SP182-201ENST00000516064 82 ntBASIC1.77□□□□□ -2.13
UBQLN3Q9H347 Y_RNA.670-201ENST00000516255 105 ntBASIC1.77□□□□□ -2.13
UBQLN3Q9H347 Y_RNA.708-201ENST00000516950 96 ntBASIC1.77□□□□□ -2.13
UBQLN3Q9H347 SUMO2P18-201ENST00000518873 252 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms