Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC002429.1-201ENST00000437672 148 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 AC245047.7-201ENST00000440265 293 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.5□□□□□ -2.33
VCX3BQ9H321 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.5□□□□□ -2.33
VCX3BQ9H321 MTCO3P8-201ENST00000453691 755 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 RNU7-138P-201ENST00000459479 64 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 SNORD79.1-201ENST00000516069 84 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 SNORA18.6-201ENST00000516792 115 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 AL590705.4-201ENST00000532209 134 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 AC008015.1-201ENST00000555505 465 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 MIR3973-201ENST00000579824 107 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 AC068790.6-201ENST00000602558 258 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 AC080078.2-201ENST00000603766 501 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 AL513534.2-201ENST00000603836 250 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 AC097065.2-201ENST00000608159 533 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 MIR8054-201ENST00000620877 86 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 AC106754.2-201ENST00000623006 233 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 AC009161.2-201ENST00000624626 138 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 MTND4P5-201ENST00000435821 1374 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 RNU6-1305P-201ENST00000364353 104 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 RNU6-1286P-201ENST00000383871 107 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 RNU6-1106P-201ENST00000390845 107 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 MIR1261-201ENST00000408659 82 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 RN7SKP200-201ENST00000410564 320 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 RNA5SP494-201ENST00000410653 129 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.49□□□□□ -2.33
VCX3BQ9H321 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.49□□□□□ -2.33
VCX3BQ9H321 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.49□□□□□ -2.33
VCX3BQ9H321 SNRPFP3-201ENST00000457792 225 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 RNU7-57P-201ENST00000459540 60 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 AC108210.2-201ENST00000503681 201 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.49□□□□□ -2.33
VCX3BQ9H321 AC010493.1-201ENST00000513479 292 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.49□□□□□ -2.33
VCX3BQ9H321 RNU1-142P-201ENST00000516682 145 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 RNU7-128P-201ENST00000517247 62 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.49□□□□□ -2.33
VCX3BQ9H321 AL121579.1-201ENST00000555129 305 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.49□□□□□ -2.33
VCX3BQ9H321 AC022432.1-201ENST00000595739 310 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 AP000907.4-201ENST00000604143 237 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 AC080078.3-201ENST00000605407 463 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 AL359075.3-201ENST00000613288 217 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 SNORD3E-202ENST00000627253 216 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 AC018630.2-201ENST00000534866 2403 ntBASIC0.49□□□□□ -2.33
VCX3BQ9H321 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
VCX3BQ9H321 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
VCX3BQ9H321 RNU6-553P-201ENST00000364047 96 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 RNU6-969P-201ENST00000383900 105 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 SNORA67.2-201ENST00000384300 149 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 MIR660-201ENST00000385235 97 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 RNU6-903P-201ENST00000391270 109 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 AF228730.1-201ENST00000397972 663 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 AL031577.2-201ENST00000404133 280 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 RNU2-9P-201ENST00000410194 145 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 RNU6-248P-201ENST00000410720 107 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 MTATP6P19-201ENST00000413797 659 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 CDK8P2-201ENST00000415020 547 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.48□□□□□ -2.33
VCX3BQ9H321 AC008134.1-201ENST00000420943 193 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.48□□□□□ -2.33
VCX3BQ9H321 CYCSP46-201ENST00000423569 204 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.48□□□□□ -2.33
VCX3BQ9H321 AC245047.3-201ENST00000429428 127 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.48□□□□□ -2.33
VCX3BQ9H321 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.48□□□□□ -2.33
VCX3BQ9H321 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 SNORD42A-201ENST00000459584 64 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 AC025465.4-201ENST00000513422 638 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 AC025647.1-201ENST00000517879 253 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.48□□□□□ -2.33
VCX3BQ9H321 AC009094.1-201ENST00000564443 426 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 GHRLOS.1-201ENST00000610995 70 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 AC016597.2-201ENST00000613256 341 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 AC079248.2-201ENST00000623779 326 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 AL078596.1-201ENST00000624856 447 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 snoZ196.1-201ENST00000625269 89 ntBASIC0.48□□□□□ -2.33
VCX3BQ9H321 RNU6-181P-201ENST00000363225 107 ntBASIC0.47□□□□□ -2.33
VCX3BQ9H321 MIR487A-201ENST00000385009 80 ntBASIC0.47□□□□□ -2.33
VCX3BQ9H321 RNA5SP504-201ENST00000410676 117 ntBASIC0.47□□□□□ -2.33
VCX3BQ9H321 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.47□□□□□ -2.33
VCX3BQ9H321 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.47□□□□□ -2.33
VCX3BQ9H321 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.47□□□□□ -2.33
VCX3BQ9H321 MTND3P9-201ENST00000429526 346 ntBASIC0.47□□□□□ -2.33
VCX3BQ9H321 AL356010.1-201ENST00000456364 102 ntBASIC0.47□□□□□ -2.33
VCX3BQ9H321 RNU6-221P-201ENST00000459541 99 ntBASIC0.47□□□□□ -2.33
VCX3BQ9H321 AC007215.1-201ENST00000464893 276 ntBASIC0.47□□□□□ -2.33
VCX3BQ9H321 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.47□□□□□ -2.33
VCX3BQ9H321 RPS26P48-201ENST00000491713 339 ntBASIC0.47□□□□□ -2.33
VCX3BQ9H321 AF186996.7-201ENST00000492781 209 ntBASIC0.47□□□□□ -2.33
VCX3BQ9H321 HMGB1P29-201ENST00000505659 499 ntBASIC0.47□□□□□ -2.33
VCX3BQ9H321 RNU6-445P-201ENST00000516949 107 ntBASIC0.47□□□□□ -2.33
VCX3BQ9H321 RNU6-232P-201ENST00000517144 64 ntBASIC0.47□□□□□ -2.33
VCX3BQ9H321 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.47□□□□□ -2.33
VCX3BQ9H321 HIF1AP1-201ENST00000553642 175 ntBASIC0.47□□□□□ -2.33
VCX3BQ9H321 AC005858.4-201ENST00000623191 700 ntBASIC0.47□□□□□ -2.33
VCX3BQ9H321 AF246928.1-201ENST00000623768 87 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms