Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RPS29P2-201ENST00000479278 136 ntBASIC4.09□□□□□ -1.75
NUCKS1Q9H1E3 PHBP14-201ENST00000512887 367 ntBASIC4.09□□□□□ -1.75
NUCKS1Q9H1E3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.09□□□□□ -1.75
NUCKS1Q9H1E3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.09□□□□□ -1.75
NUCKS1Q9H1E3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NUCKS1Q9H1E3 AL021368.2-201ENST00000606125 5352 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-600P-201ENST00000362524 99 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-647P-201ENST00000364243 107 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 MIR548B-201ENST00000385247 97 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 MIR591-201ENST00000385290 95 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 RNA5SP424-201ENST00000390988 115 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 Y_RNA.587-201ENST00000391210 103 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 AC005300.1-201ENST00000428401 373 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 HMGN2P20-201ENST00000437531 273 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 SNORA71B-202ENST00000439232 272 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 Y_RNA.649-201ENST00000459077 103 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 RAC1P2-201ENST00000511164 579 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 AC105137.2-201ENST00000569073 466 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 AC091178.2-201ENST00000584401 117 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 AC131055.1-201ENST00000584626 316 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 AC106754.2-201ENST00000623006 233 ntBASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.08□□□□□ -1.76
NUCKS1Q9H1E3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 RNU4-15P-201ENST00000362613 141 ntBASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 Y_RNA.40-201ENST00000362645 93 ntBASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 Y_RNA.124-201ENST00000363339 93 ntBASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 SNORA7.2-201ENST00000364446 145 ntBASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 MIR518C-201ENST00000384822 101 ntBASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 MIRLET7F2-201ENST00000385277 83 ntBASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 AC006989.1-201ENST00000427212 131 ntBASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 AP002884.2-201ENST00000471647 395 ntBASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 Y_RNA.690-201ENST00000516603 95 ntBASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 RNU2-44P-201ENST00000516795 194 ntBASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 AP003357.1-201ENST00000604497 148 ntBASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 SNORA62.6-201ENST00000606322 83 ntBASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUCKS1Q9H1E3 MFSD8-236ENST00000641509 4050 ntBASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-529P-201ENST00000363383 104 ntBASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-484P-201ENST00000384016 107 ntBASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 AL603914.1-201ENST00000401964 204 ntBASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 RN7SKP101-201ENST00000411376 320 ntBASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 SRIP1-201ENST00000489235 288 ntBASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 RN7SKP19-201ENST00000516016 252 ntBASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 RNA5SP208-201ENST00000516156 78 ntBASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-928P-201ENST00000516876 104 ntBASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUCKS1Q9H1E3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 AL353746.1-201ENST00000566293 6881 ntBASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-508P-201ENST00000363231 103 ntBASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 U8.6-201ENST00000364939 135 ntBASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 Y_RNA.346-201ENST00000365385 112 ntBASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 Y_RNA.432-201ENST00000384087 111 ntBASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-106P-201ENST00000384405 107 ntBASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 SNORD116-13-201ENST00000384408 92 ntBASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-905P-201ENST00000384434 107 ntBASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-136P-201ENST00000384663 107 ntBASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-19P-201ENST00000384718 107 ntBASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 SNORA12.1-201ENST00000390873 148 ntBASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 AL133475.1-201ENST00000404414 305 ntBASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 U6atac.2-201ENST00000408644 118 ntBASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 AC090515.1-201ENST00000465295 476 ntBASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUCKS1Q9H1E3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 SNORD114-19-201ENST00000363072 75 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 MIR134-201ENST00000385258 73 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 AC002075.2-201ENST00000425207 252 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms