Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RNF38Q9H0F5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF38Q9H0F5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF38Q9H0F5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF38Q9H0F5 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.37□□□□□ -1.87
RNF38Q9H0F5 RNU6-1117P-201ENST00000384525 104 ntBASIC3.37□□□□□ -1.87
RNF38Q9H0F5 AL353705.1-201ENST00000433468 480 ntBASIC3.37□□□□□ -1.87
RNF38Q9H0F5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.37□□□□□ -1.87
RNF38Q9H0F5 AC006445.1-201ENST00000491925 405 ntBASIC3.37□□□□□ -1.87
RNF38Q9H0F5 MRPS36P2-201ENST00000512569 299 ntBASIC3.37□□□□□ -1.87
RNF38Q9H0F5 AC018692.3-201ENST00000623929 123 ntBASIC3.37□□□□□ -1.87
RNF38Q9H0F5 AC091895.1-201ENST00000624494 256 ntBASIC3.37□□□□□ -1.87
RNF38Q9H0F5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF38Q9H0F5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RNF38Q9H0F5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RNF38Q9H0F5 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF38Q9H0F5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF38Q9H0F5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RNF38Q9H0F5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF38Q9H0F5 MIR30E-201ENST00000362104 92 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 RNU6-324P-201ENST00000363957 106 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 RNU6-449P-201ENST00000383914 107 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 Y_RNA.497-201ENST00000384447 98 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 NDUFB4P4-201ENST00000404822 243 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 RNA5SP390-201ENST00000410191 113 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 RNA5SP229-201ENST00000410809 99 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF38Q9H0F5 RN7SL863P-201ENST00000462370 296 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 CENPBD1P1-201ENST00000464061 469 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 S100A11P2-201ENST00000467589 312 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 RPL31P41-201ENST00000477967 372 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 AC103975.1-201ENST00000482506 483 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF38Q9H0F5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF38Q9H0F5 RNU6-107P-201ENST00000516643 102 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 CYCSP23-201ENST00000519781 313 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 MTND1P7-201ENST00000632801 297 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 MIR3674-201ENST00000636576 68 ntBASIC3.36□□□□□ -1.87
RNF38Q9H0F5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF38Q9H0F5 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.35□□□□□ -1.87
RNF38Q9H0F5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RNF38Q9H0F5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF38Q9H0F5 Y_RNA.7-201ENST00000362352 102 ntBASIC3.35□□□□□ -1.87
RNF38Q9H0F5 Y_RNA.182-201ENST00000363880 111 ntBASIC3.35□□□□□ -1.87
RNF38Q9H0F5 Y_RNA.329-201ENST00000365209 107 ntBASIC3.35□□□□□ -1.87
RNF38Q9H0F5 RNU6-487P-201ENST00000365430 104 ntBASIC3.35□□□□□ -1.87
RNF38Q9H0F5 Y_RNA.412-201ENST00000384001 104 ntBASIC3.35□□□□□ -1.87
RNF38Q9H0F5 Y_RNA.415-201ENST00000384012 112 ntBASIC3.35□□□□□ -1.87
RNF38Q9H0F5 RNU6-131P-201ENST00000391144 107 ntBASIC3.35□□□□□ -1.87
RNF38Q9H0F5 RNU2-54P-201ENST00000410299 190 ntBASIC3.35□□□□□ -1.87
RNF38Q9H0F5 SEPT7P4-201ENST00000437076 306 ntBASIC3.35□□□□□ -1.87
RNF38Q9H0F5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF38Q9H0F5 AC010401.1-201ENST00000463867 348 ntBASIC3.35□□□□□ -1.87
RNF38Q9H0F5 CYP4A27P-201ENST00000567218 190 ntBASIC3.35□□□□□ -1.87
RNF38Q9H0F5 MIR4325-201ENST00000583049 90 ntBASIC3.35□□□□□ -1.87
RNF38Q9H0F5 RNU6-91P-201ENST00000607774 107 ntBASIC3.35□□□□□ -1.87
RNF38Q9H0F5 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF38Q9H0F5 MAPK10-362ENST00000641864 4484 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 AP003122.5-201ENST00000527668 3766 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RNF38Q9H0F5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RNF38Q9H0F5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
RNF38Q9H0F5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RNF38Q9H0F5 Y_RNA.238-201ENST00000364441 102 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 Y_RNA.343-201ENST00000365354 112 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 RNU6-805P-201ENST00000365643 106 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 U3.26-201ENST00000391236 204 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 SNORA48.8-201ENST00000391324 134 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 RNA5SP293-201ENST00000410527 113 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 RNA5SP475-201ENST00000410568 110 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 RNU2-51P-201ENST00000410708 197 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 AC009963.1-201ENST00000417265 157 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.34□□□□□ -1.87
RNF38Q9H0F5 AC007215.1-201ENST00000464893 276 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF38Q9H0F5 RNA5SP272-201ENST00000516095 111 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 SUMO2P18-201ENST00000518873 252 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 TGIF1P1-201ENST00000558095 802 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 uc_338.14-201ENST00000613162 166 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.34□□□□□ -1.87
RNF38Q9H0F5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF38Q9H0F5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.33□□□□□ -1.88
RNF38Q9H0F5 RNU6-1290P-201ENST00000362957 109 ntBASIC3.33□□□□□ -1.88
RNF38Q9H0F5 RNU6-818P-201ENST00000364837 108 ntBASIC3.33□□□□□ -1.88
RNF38Q9H0F5 RNU4-17P-201ENST00000365598 141 ntBASIC3.33□□□□□ -1.88
RNF38Q9H0F5 AP002088.1-201ENST00000382740 395 ntBASIC3.33□□□□□ -1.88
RNF38Q9H0F5 SNORA18.3-201ENST00000384122 132 ntBASIC3.33□□□□□ -1.88
RNF38Q9H0F5 RNU6-1310P-201ENST00000384153 107 ntBASIC3.33□□□□□ -1.88
RNF38Q9H0F5 Y_RNA.488-201ENST00000384403 102 ntBASIC3.33□□□□□ -1.88
RNF38Q9H0F5 RNU6-417P-201ENST00000384712 107 ntBASIC3.33□□□□□ -1.88
RNF38Q9H0F5 Y_RNA.580-201ENST00000391004 95 ntBASIC3.33□□□□□ -1.88
RNF38Q9H0F5 AC021205.2-201ENST00000480069 347 ntBASIC3.33□□□□□ -1.88
RNF38Q9H0F5 AIG1P1-201ENST00000503376 148 ntBASIC3.33□□□□□ -1.88
RNF38Q9H0F5 RNA5SP341-201ENST00000516261 117 ntBASIC3.33□□□□□ -1.88
RNF38Q9H0F5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF38Q9H0F5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF38Q9H0F5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms