Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.49□□□□□ -2.49
SCAPERQ9BY12 AC096531.1-201ENST00000419107 107 ntBASIC-0.49□□□□□ -2.49
SCAPERQ9BY12 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.49□□□□□ -2.49
SCAPERQ9BY12 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.49□□□□□ -2.49
SCAPERQ9BY12 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.49□□□□□ -2.49
SCAPERQ9BY12 DEFB108A-201ENST00000530110 222 ntBASIC-0.49□□□□□ -2.49
SCAPERQ9BY12 MIR4789-201ENST00000577469 82 ntBASIC-0.49□□□□□ -2.49
SCAPERQ9BY12 MIR3923-201ENST00000579521 83 ntBASIC-0.49□□□□□ -2.49
SCAPERQ9BY12 AC006927.4-201ENST00000639187 543 ntBASIC-0.49□□□□□ -2.49
SCAPERQ9BY12 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
SCAPERQ9BY12 SNORD118-201ENST00000363593 134 ntBASIC-0.5□□□□□ -2.49
SCAPERQ9BY12 U6.112-201ENST00000384129 70 ntBASIC-0.5□□□□□ -2.49
SCAPERQ9BY12 SNORA12.1-201ENST00000390873 148 ntBASIC-0.5□□□□□ -2.49
SCAPERQ9BY12 RNU6-57P-201ENST00000411348 103 ntBASIC-0.5□□□□□ -2.49
SCAPERQ9BY12 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.5□□□□□ -2.49
SCAPERQ9BY12 AC108729.2-201ENST00000476543 840 ntBASIC-0.5□□□□□ -2.49
SCAPERQ9BY12 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.5□□□□□ -2.49
SCAPERQ9BY12 AC087883.1-201ENST00000551882 391 ntBASIC-0.5□□□□□ -2.49
SCAPERQ9BY12 AC112187.2-201ENST00000604345 283 ntBASIC-0.5□□□□□ -2.49
SCAPERQ9BY12 AC131159.1-201ENST00000621854 213 ntBASIC-0.5□□□□□ -2.49
SCAPERQ9BY12 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 MIR106A-201ENST00000384870 81 ntBASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 MIR145-201ENST00000384967 88 ntBASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 RNU6-679P-201ENST00000391003 106 ntBASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 RNU4-22P-201ENST00000411058 166 ntBASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 AC007547.1-201ENST00000462177 490 ntBASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 AP003716.2-201ENST00000528260 108 ntBASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 RPL23AP91-201ENST00000569211 455 ntBASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 TMF1P1-201ENST00000576058 373 ntBASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 MTND3P19-201ENST00000603825 345 ntBASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 AC104695.3-201ENST00000604052 296 ntBASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 AC099654.8-201ENST00000637757 681 ntBASIC-0.51□□□□□ -2.49
SCAPERQ9BY12 SNORA9.1-201ENST00000362412 131 ntBASIC-0.52□□□□□ -2.49
SCAPERQ9BY12 RNU6-853P-201ENST00000364306 107 ntBASIC-0.52□□□□□ -2.49
SCAPERQ9BY12 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.52□□□□□ -2.49
SCAPERQ9BY12 MIR153-2-201ENST00000385225 87 ntBASIC-0.52□□□□□ -2.49
SCAPERQ9BY12 MRPL42P3-201ENST00000401492 326 ntBASIC-0.52□□□□□ -2.49
SCAPERQ9BY12 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.52□□□□□ -2.49
SCAPERQ9BY12 AC119751.4-201ENST00000507498 357 ntBASIC-0.52□□□□□ -2.49
SCAPERQ9BY12 RNU6-948P-201ENST00000516374 107 ntBASIC-0.52□□□□□ -2.49
SCAPERQ9BY12 RNU1-142P-201ENST00000516682 145 ntBASIC-0.52□□□□□ -2.49
SCAPERQ9BY12 MIR3192-201ENST00000584920 77 ntBASIC-0.52□□□□□ -2.49
SCAPERQ9BY12 MIR8076-201ENST00000611401 83 ntBASIC-0.52□□□□□ -2.49
SCAPERQ9BY12 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.52□□□□□ -2.49
SCAPERQ9BY12 RNU6-545P-201ENST00000362681 104 ntBASIC-0.53□□□□□ -2.49
SCAPERQ9BY12 RNU5B-1-201ENST00000363286 116 ntBASIC-0.53□□□□□ -2.49
SCAPERQ9BY12 MIR300-201ENST00000401138 83 ntBASIC-0.53□□□□□ -2.49
SCAPERQ9BY12 AL158050.1-201ENST00000416077 457 ntBASIC-0.53□□□□□ -2.49
SCAPERQ9BY12 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.53□□□□□ -2.49
SCAPERQ9BY12 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.53□□□□□ -2.49
SCAPERQ9BY12 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.53□□□□□ -2.49
SCAPERQ9BY12 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.53□□□□□ -2.49
SCAPERQ9BY12 AC021451.1-201ENST00000523498 1129 ntBASIC-0.53□□□□□ -2.49
SCAPERQ9BY12 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.53□□□□□ -2.49
SCAPERQ9BY12 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.54□□□□□ -2.5
SCAPERQ9BY12 RNU6-78P-201ENST00000362897 107 ntBASIC-0.54□□□□□ -2.5
SCAPERQ9BY12 RNU6-527P-201ENST00000363425 104 ntBASIC-0.54□□□□□ -2.5
SCAPERQ9BY12 SMIM11P1-201ENST00000369586 178 ntBASIC-0.54□□□□□ -2.5
SCAPERQ9BY12 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.54□□□□□ -2.5
SCAPERQ9BY12 MIR593-201ENST00000384856 100 ntBASIC-0.54□□□□□ -2.5
SCAPERQ9BY12 AC245047.3-201ENST00000429428 127 ntBASIC-0.54□□□□□ -2.5
SCAPERQ9BY12 RNU6-150P-201ENST00000516237 95 ntBASIC-0.54□□□□□ -2.5
SCAPERQ9BY12 RNU1-117P-201ENST00000517041 158 ntBASIC-0.54□□□□□ -2.5
SCAPERQ9BY12 MIR3612-201ENST00000579753 87 ntBASIC-0.54□□□□□ -2.5
SCAPERQ9BY12 AC008752.3-201ENST00000588113 712 ntBASIC-0.54□□□□□ -2.5
SCAPERQ9BY12 AC092447.9-201ENST00000603395 144 ntBASIC-0.54□□□□□ -2.5
SCAPERQ9BY12 AC090186.1-201ENST00000605991 572 ntBASIC-0.54□□□□□ -2.5
SCAPERQ9BY12 AL450270.1-201ENST00000606160 391 ntBASIC-0.54□□□□□ -2.5
SCAPERQ9BY12 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.54□□□□□ -2.5
SCAPERQ9BY12 MIR635-201ENST00000384830 98 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 RNU4-63P-201ENST00000411313 118 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 SNORD83.1-201ENST00000411362 77 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AL590135.1-201ENST00000422215 156 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AL590632.1-201ENST00000424289 371 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AC019205.3-201ENST00000424573 156 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AC016700.2-201ENST00000446011 156 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AC015911.1-201ENST00000495111 156 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AC114811.1-201ENST00000507207 168 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 MIR4743-201ENST00000584576 69 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 BCRP9-201ENST00000605312 388 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AC103706.2-201ENST00000638080 240 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 RNU6-289P-201ENST00000364093 107 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AC083799.1-201ENST00000366451 910 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 RNU6-929P-201ENST00000384429 107 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 RNU6-747P-201ENST00000390928 104 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 RNU6-241P-201ENST00000391148 104 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 BTF3P11-201ENST00000426582 477 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 USP9YP28-201ENST00000435142 589 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 SEPT14P24-201ENST00000447236 180 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms