Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 Y_RNA.460-201ENST00000384255 102 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 RNU6-611P-201ENST00000384276 104 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 Y_RNA.524-201ENST00000384564 100 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 Y_RNA.561-201ENST00000384694 100 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 Y_RNA.577-201ENST00000384794 101 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 SNORA12-201ENST00000391162 147 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 AC007098.1-201ENST00000420122 367 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 AC018868.1-201ENST00000491307 315 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 AC022493.2-201ENST00000506122 481 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 Y_RNA.706-201ENST00000516933 99 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 HSPE1P18-201ENST00000517602 280 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 SNRPGP20-201ENST00000604477 205 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 Y_RNA.319-201ENST00000365138 92 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 SNORA25B-201ENST00000365507 128 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 RNU6-245P-201ENST00000384020 107 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 Y_RNA.535-201ENST00000384612 99 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 RNU2-2P-201ENST00000410396 191 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 RNU2-20P-201ENST00000410425 191 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 RNU2-48P-201ENST00000410694 191 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 RNU6-1304P-201ENST00000411374 106 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 AL353997.1-201ENST00000432936 108 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 AL035666.1-201ENST00000446195 348 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 RPL23AP42-201ENST00000471152 471 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 NDUFA5P6-201ENST00000542110 379 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 AC027288.2-201ENST00000553028 243 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 AC090517.1-201ENST00000569307 266 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 AC004584.2-201ENST00000570407 410 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 U2.15-201ENST00000611544 191 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 U2.16-201ENST00000613119 191 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 U2.12-201ENST00000613778 191 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 U2.20-201ENST00000613956 192 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 U2.9-201ENST00000615427 191 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 AC005296.1-201ENST00000616145 209 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 U2.11-201ENST00000616345 191 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 U2.2-201ENST00000616535 191 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 AL132822.1-201ENST00000617063 513 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 U2.3-201ENST00000617785 191 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 U2.19-201ENST00000618602 191 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 RNU2-1-201ENST00000618664 191 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 U2.6-201ENST00000619225 191 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 U2.5-201ENST00000619465 191 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 U2.10-201ENST00000620268 191 ntBASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC28BQ9BUN5 AC092881.1-201ENST00000638218 2733 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 Y_RNA.11-201ENST00000362375 109 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 RNU1-76P-201ENST00000362903 159 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 SNORA64-201ENST00000384674 134 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 RNU6-541P-201ENST00000384709 110 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 MIR190B-201ENST00000401119 79 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 AL445685.2-201ENST00000422551 342 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 MTCO3P29-201ENST00000432119 779 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 AL353689.1-201ENST00000438895 199 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 AC099799.1-201ENST00000439809 192 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 RPL23AP3-201ENST00000453844 468 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 RNU6-58P-201ENST00000517143 103 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 AC034114.1-201ENST00000520293 285 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 AC016727.2-201ENST00000603988 621 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 AC005034.5-201ENST00000604219 466 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 AL050343.2-201ENST00000607338 280 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 AL355802.3-201ENST00000607571 545 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 TCL6_2.1-201ENST00000615162 119 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 AC005562.2-201ENST00000618264 111 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 AC090574.1-201ENST00000623186 233 ntBASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC28BQ9BUN5 RNU6-280P-201ENST00000364145 104 ntBASIC1.79□□□□□ -2.12
CCDC28BQ9BUN5 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
CCDC28BQ9BUN5 Y_RNA.364-201ENST00000365532 101 ntBASIC1.79□□□□□ -2.12
CCDC28BQ9BUN5 SNORA67.3-201ENST00000384366 140 ntBASIC1.79□□□□□ -2.12
CCDC28BQ9BUN5 MIR559-201ENST00000385188 96 ntBASIC1.79□□□□□ -2.12
CCDC28BQ9BUN5 RNU1-139P-201ENST00000391307 165 ntBASIC1.79□□□□□ -2.12
CCDC28BQ9BUN5 AL357139.1-201ENST00000407792 426 ntBASIC1.79□□□□□ -2.12
CCDC28BQ9BUN5 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.79□□□□□ -2.12
CCDC28BQ9BUN5 HMGN1P13-201ENST00000505795 138 ntBASIC1.79□□□□□ -2.12
CCDC28BQ9BUN5 AC107393.1-201ENST00000512403 346 ntBASIC1.79□□□□□ -2.12
CCDC28BQ9BUN5 AC008549.1-201ENST00000512900 643 ntBASIC1.79□□□□□ -2.12
CCDC28BQ9BUN5 RNU6-1170P-201ENST00000515974 106 ntBASIC1.79□□□□□ -2.12
CCDC28BQ9BUN5 RNU6-976P-201ENST00000516086 111 ntBASIC1.79□□□□□ -2.12
CCDC28BQ9BUN5 RNU7-4P-201ENST00000516961 62 ntBASIC1.79□□□□□ -2.12
CCDC28BQ9BUN5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms