Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 Y_RNA.22-201ENST00000362492 102 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 Y_RNA.504-201ENST00000384481 104 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 MIR549A-201ENST00000385268 96 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 CALM2P3-201ENST00000400429 449 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 MTCYBP36-201ENST00000404146 440 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 MIR1253-201ENST00000408273 105 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 RNA5SP511-201ENST00000410487 115 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 RNU6-177P-201ENST00000411257 104 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 AC016909.1-201ENST00000415916 166 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.05□□□□□ -2.4
LIMD2Q9BT23 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.05□□□□□ -2.4
LIMD2Q9BT23 STAG3L5P-204ENST00000443759 179 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 LINC01399-202ENST00000458450 244 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 RNU7-128P-201ENST00000517247 62 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 AC025647.1-201ENST00000517879 253 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.05□□□□□ -2.4
LIMD2Q9BT23 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.05□□□□□ -2.4
LIMD2Q9BT23 Z99497.2-201ENST00000603634 310 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
LIMD2Q9BT23 AC022709.1-201ENST00000615967 87 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 MIR924-201ENST00000638017 53 ntBASIC0.05□□□□□ -2.4
LIMD2Q9BT23 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.05□□□□□ -2.4
LIMD2Q9BT23 Y_RNA.36-201ENST00000362602 112 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 SNORA36A-201ENST00000384221 132 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 RNU6-793P-201ENST00000384233 104 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 RNU6-1093P-201ENST00000391194 107 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 RNA5SP193-201ENST00000410353 107 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 RPS26P42-201ENST00000413485 326 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 AC093019.1-201ENST00000443135 252 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 AC009237.7-201ENST00000447357 229 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 AC074290.1-201ENST00000448883 135 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.04□□□□□ -2.4
LIMD2Q9BT23 RNU7-94P-201ENST00000459576 63 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.04□□□□□ -2.4
LIMD2Q9BT23 AC091874.1-201ENST00000511402 339 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 AC109810.1-201ENST00000534066 224 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 SNORA4-201ENST00000584302 138 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 SNORA28-201ENST00000606769 126 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 AL096861.1-201ENST00000610899 123 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 SEPT14P17-201ENST00000617978 177 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 AC006001.4-201ENST00000622243 395 ntBASIC0.04□□□□□ -2.4
LIMD2Q9BT23 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.04□□□□□ -2.4
LIMD2Q9BT23 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
LIMD2Q9BT23 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.03□□□□□ -2.4
LIMD2Q9BT23 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 Y_RNA.97-201ENST00000363094 102 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 RNU6-1240P-201ENST00000365155 104 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 Y_RNA.354-201ENST00000365448 111 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 AC008134.1-201ENST00000420943 193 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 RPL37P21-201ENST00000435890 276 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 RPL22P17-201ENST00000438729 315 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 AC104332.1-201ENST00000440471 797 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 EEF1A1P39-201ENST00000440791 250 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 TPT1P7-201ENST00000458300 517 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 AC112204.1-201ENST00000502591 103 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.03□□□□□ -2.4
LIMD2Q9BT23 AC010587.1-201ENST00000505809 469 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.03□□□□□ -2.4
LIMD2Q9BT23 RNU7-99P-201ENST00000516271 62 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.03□□□□□ -2.4
LIMD2Q9BT23 MIR4778-201ENST00000577635 80 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 MIR4431-201ENST00000579990 94 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 MIR4305-201ENST00000583252 102 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 RN7SL793P-201ENST00000583259 296 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 AC097065.2-201ENST00000608159 533 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 AC019226.2-201ENST00000625973 424 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 AL445984.1-201ENST00000637834 659 ntBASIC0.03□□□□□ -2.4
LIMD2Q9BT23 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.03□□□□□ -2.4
LIMD2Q9BT23 AP000568.1-201ENST00000282964 442 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
LIMD2Q9BT23 Y_RNA.110-201ENST00000363220 99 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 RNY1-201ENST00000364228 113 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 Y_RNA.238-201ENST00000364441 102 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 SNORD115-7-201ENST00000365306 82 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 RNY1P8-201ENST00000383970 114 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 SNORA67.2-201ENST00000384300 149 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 RNU6-424P-201ENST00000384367 105 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 RNY1P4-201ENST00000384595 115 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 Y_RNA.576-201ENST00000384781 102 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 MIR140-201ENST00000385282 100 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.02□□□□□ -2.41
LIMD2Q9BT23 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.02□□□□□ -2.41
LIMD2Q9BT23 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.02□□□□□ -2.41
LIMD2Q9BT23 MTND3P1-201ENST00000441336 220 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 AC004386.2-201ENST00000441858 148 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.02□□□□□ -2.41
LIMD2Q9BT23 RNU7-57P-201ENST00000459540 60 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 RNU6-221P-201ENST00000459541 99 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.02□□□□□ -2.41
LIMD2Q9BT23 OR9P1P-201ENST00000496431 281 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.02□□□□□ -2.41
LIMD2Q9BT23 AC079140.5-201ENST00000507882 310 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 AC025465.4-201ENST00000513422 638 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 AC105185.1-201ENST00000518705 535 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.02□□□□□ -2.41
LIMD2Q9BT23 ZNF519P3-201ENST00000557158 1032 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 AC011195.1-201ENST00000578177 177 ntBASIC0.02□□□□□ -2.41
LIMD2Q9BT23 AC023932.2-201ENST00000603176 175 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms