Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC009487.4-201ENST00000624969 3585 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 Y_RNA.58-201ENST00000362807 102 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 Y_RNA.142-201ENST00000363491 102 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 Y_RNA.154-201ENST00000363624 102 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 RNU6-1305P-201ENST00000364353 104 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 RNY3P1-201ENST00000365085 102 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 Y_RNA.356-201ENST00000365475 113 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 RNY3-201ENST00000365484 102 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 RNU6-301P-201ENST00000384277 107 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 RNU6-700P-201ENST00000391043 107 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 AL356432.1-201ENST00000405809 419 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 RPS20P15-201ENST00000412792 311 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 RPL7P42-201ENST00000481005 679 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 AC234781.5-201ENST00000508429 271 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 AC027288.2-201ENST00000553028 243 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 AL590808.1-201ENST00000618696 141 ntBASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.4□□□□□ -2.03
HERPUD2Q9BSE4 RNU6-418P-201ENST00000384035 107 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 MT-TD-201ENST00000387419 68 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 SNORA75.4-201ENST00000391278 119 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 RNA5SP501-201ENST00000410990 112 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 MTCO3P29-201ENST00000432119 779 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 AL353689.1-201ENST00000438895 199 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 MTCO1P44-201ENST00000441935 243 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 AL357134.1-201ENST00000445848 426 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 RPL23AP6-201ENST00000446637 472 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 RPL23AP3-201ENST00000453844 468 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 RNA5SP57-201ENST00000459463 123 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 AC010531.2-201ENST00000465012 153 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 RPS27P21-201ENST00000486977 252 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 AC107222.1-201ENST00000510899 637 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 RNU6-948P-201ENST00000516374 107 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 RNU6-344P-201ENST00000516635 111 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 RNU1-117P-201ENST00000517041 158 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 SUMO2P18-201ENST00000518873 252 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 AC021269.2-201ENST00000532318 330 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 AC005786.1-201ENST00000588553 154 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 AC083806.3-201ENST00000614016 455 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 AL162373.1-201ENST00000620433 407 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 AL159152.1-201ENST00000635019 2587 ntBASIC2.39□□□□□ -2.03
HERPUD2Q9BSE4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 RNA5SP289-201ENST00000362332 137 ntBASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 AC004866.1-201ENST00000411748 78 ntBASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 WARS2P1-201ENST00000429678 537 ntBASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 AL445305.1-201ENST00000432577 575 ntBASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 KPNA2P1-201ENST00000458289 1591 ntBASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 MTND4P17-201ENST00000470444 350 ntBASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 RNU2-34P-201ENST00000516534 121 ntBASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 AP003072.1-201ENST00000531740 145 ntBASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 AL355802.3-201ENST00000607571 545 ntBASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 SNORD11B-201ENST00000607707 90 ntBASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 PART1_1.1-201ENST00000611761 217 ntBASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 MIR6766-201ENST00000622641 72 ntBASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
HERPUD2Q9BSE4 AC005336.3-201ENST00000623833 2679 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 MIR340-201ENST00000362125 95 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 RNY1P16-201ENST00000363063 111 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 RNU6-873P-201ENST00000363833 107 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 Y_RNA.474-201ENST00000384341 102 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 RNU6-159P-201ENST00000391080 106 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 RNA5SP212-201ENST00000391223 107 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 U3.40-201ENST00000408706 208 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 RN7SL636P-201ENST00000497504 294 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 AC067942.3-201ENST00000512025 362 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 AC020661.2-201ENST00000560114 134 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 MIR5007-201ENST00000583098 95 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 AC013412.1-201ENST00000610687 192 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 AL773524.1-201ENST00000614065 229 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 AL078596.1-201ENST00000624856 447 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
HERPUD2Q9BSE4 RNU1-62P-201ENST00000362599 164 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 Y_RNA.162-201ENST00000363683 102 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 RNU6-331P-201ENST00000384724 107 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 MIR586-201ENST00000385035 97 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 AL033519.2-201ENST00000403958 392 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 AC005534.2-201ENST00000431047 433 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 AL353997.1-201ENST00000432936 108 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms