Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 U4atac.1-201ENST00000618345 95 ntBASIC2.19□□□□□ -2.06
RTP3Q9BQQ7 AC090517.3-201ENST00000625170 141 ntBASIC2.19□□□□□ -2.06
RTP3Q9BQQ7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.19□□□□□ -2.06
RTP3Q9BQQ7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RTP3Q9BQQ7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.19□□□□□ -2.06
RTP3Q9BQQ7 RNU4-56P-201ENST00000364700 142 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 RNU6-99P-201ENST00000364721 107 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 RNU6-474P-201ENST00000384243 107 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 RNU6-1274P-201ENST00000384557 107 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 MIR29B2-201ENST00000385055 81 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 MTCYBP2-201ENST00000407745 171 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 RNA5SP201-201ENST00000410316 124 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 RNA5SP494-201ENST00000410653 129 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 RNU2-63P-201ENST00000410792 194 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 WARS2P1-201ENST00000429678 537 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 AC145146.1-201ENST00000496370 254 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 RNU6-567P-201ENST00000516746 107 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 RNU6-699P-201ENST00000517081 110 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 AL590705.4-201ENST00000532209 134 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 GNAI2P1-201ENST00000541815 315 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 AC010928.2-201ENST00000588017 287 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 SCARNA4-201ENST00000629045 128 ntBASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RTP3Q9BQQ7 RNU6-490P-201ENST00000362985 107 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 RNU6-944P-201ENST00000364023 107 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 RNU4-9P-201ENST00000364951 139 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 RNA5SP240-201ENST00000365355 128 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 Y_RNA.405-201ENST00000383979 100 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 Y_RNA.451-201ENST00000384200 100 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 Y_RNA.463-201ENST00000384271 102 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 RNU6-378P-201ENST00000384324 107 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 Y_RNA.524-201ENST00000384564 100 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 Y_RNA.561-201ENST00000384694 100 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 AL354751.2-201ENST00000415471 210 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 CYP2C59P-201ENST00000457790 269 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 Y_RNA.639-201ENST00000458981 102 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 AC087477.1-201ENST00000465747 340 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 IGLV3-17-201ENST00000519099 244 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 CBX3P7-201ENST00000532876 502 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 SUB1P3-201ENST00000564581 315 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 MIR5701-3-201ENST00000578890 82 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 MIR5701-1-201ENST00000585138 82 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 7SK.7-201ENST00000603504 247 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 PCGEM1.1-201ENST00000613431 131 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 AC005520.5-201ENST00000613926 164 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 MIR5701-2-201ENST00000615634 82 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 AC008121.3-201ENST00000618726 433 ntBASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
RTP3Q9BQQ7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 MIR378A-201ENST00000362177 66 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 Y_RNA.5-201ENST00000362334 102 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 RNU6-1115P-201ENST00000362490 106 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 Y_RNA.796-201ENST00000364268 102 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 Y_RNA.799-201ENST00000364992 102 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 Y_RNA.355-201ENST00000365462 98 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 Y_RNA.395-201ENST00000383945 109 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 MIR32-201ENST00000384965 70 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 SNORA12.2-201ENST00000391040 156 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 SNORA46.1-201ENST00000391069 153 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 SNORA12-201ENST00000391162 147 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 Y_RNA.597-201ENST00000410463 100 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 MTCO3P29-201ENST00000432119 779 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 snoU13.30-201ENST00000458951 104 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 RPL30P10-201ENST00000488148 337 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 HMGB3P3-201ENST00000510526 400 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 RNU7-175P-201ENST00000515915 61 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 MYL12BP1-201ENST00000569826 507 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 AL356055.1-201ENST00000602528 446 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 AL355297.2-201ENST00000604792 129 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 uc_338.22-201ENST00000622722 187 ntBASIC2.16□□□□□ -2.06
RTP3Q9BQQ7 Y_RNA.31-201ENST00000362574 102 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 RNY1P10-201ENST00000363268 113 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.128-201ENST00000363391 112 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 SNORA6-201ENST00000384033 151 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.445-201ENST00000384168 102 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 RNU6-1011P-201ENST00000384668 107 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 MIR499A-201ENST00000384903 122 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 RNU6-700P-201ENST00000391043 107 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 MIR208B-201ENST00000401172 77 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 RNU6-1156P-201ENST00000410365 100 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 AL590556.1-201ENST00000423231 483 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 MRPS18CP6-201ENST00000423587 223 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 AC027124.2-201ENST00000428249 105 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 AC092423.1-201ENST00000430165 186 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 AC005534.2-201ENST00000431047 433 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms