Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MIR548AZ-201ENST00000616567 95 ntBASIC-0.57□□□□□ -2.5
ABCA3Q99758 FTX_2.1-201ENST00000618816 94 ntBASIC-0.57□□□□□ -2.5
ABCA3Q99758 BX322639.1-202ENST00000423987 2213 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 RNU2-59P-201ENST00000410482 191 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.58□□□□□ -2.5
ABCA3Q99758 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.58□□□□□ -2.5
ABCA3Q99758 RBBP4P6-201ENST00000508098 202 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 RNA5SP268-201ENST00000516828 124 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 DEFB108A-201ENST00000530110 222 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 AC087883.1-201ENST00000551882 391 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.58□□□□□ -2.5
ABCA3Q99758 AC012507.3-201ENST00000603556 477 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 AL022154.1-201ENST00000604698 785 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 MIR15A-201ENST00000607334 83 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 AC022893.3-201ENST00000607665 437 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 MIR8076-201ENST00000611401 83 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 AC006157.1-201ENST00000611750 366 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 AC112204.3-201ENST00000623822 332 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 AL450472.1-202ENST00000637286 180 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 RNU6-747P-201ENST00000390928 104 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 RNU6-241P-201ENST00000391148 104 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 AL079342.2-201ENST00000403367 482 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.58□□□□□ -2.5
ABCA3Q99758 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
ABCA3Q99758 MIR4300-201ENST00000581016 96 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 AL355297.3-201ENST00000604082 446 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 AL121992.2-201ENST00000606262 256 ntBASIC-0.58□□□□□ -2.5
ABCA3Q99758 RNU6-527P-201ENST00000363425 104 ntBASIC-0.59□□□□□ -2.5
ABCA3Q99758 SNORD114-3-201ENST00000364969 75 ntBASIC-0.59□□□□□ -2.5
ABCA3Q99758 MIR19A-201ENST00000384878 82 ntBASIC-0.59□□□□□ -2.5
ABCA3Q99758 MIR573-201ENST00000384964 99 ntBASIC-0.59□□□□□ -2.5
ABCA3Q99758 MTCYBP2-201ENST00000407745 171 ntBASIC-0.59□□□□□ -2.5
ABCA3Q99758 RNU6-994P-201ENST00000410507 111 ntBASIC-0.59□□□□□ -2.5
ABCA3Q99758 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.59□□□□□ -2.5
ABCA3Q99758 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.59□□□□□ -2.5
ABCA3Q99758 RNU7-94P-201ENST00000459576 63 ntBASIC-0.59□□□□□ -2.5
ABCA3Q99758 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.59□□□□□ -2.5
ABCA3Q99758 MIR1827-201ENST00000408549 66 ntBASIC-0.6□□□□□ -2.51
ABCA3Q99758 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.6□□□□□ -2.51
ABCA3Q99758 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.6□□□□□ -2.51
ABCA3Q99758 MTCYBP39-201ENST00000437562 491 ntBASIC-0.6□□□□□ -2.51
ABCA3Q99758 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.6□□□□□ -2.51
ABCA3Q99758 RNU6-948P-201ENST00000516374 107 ntBASIC-0.6□□□□□ -2.51
ABCA3Q99758 AC090517.1-201ENST00000569307 266 ntBASIC-0.6□□□□□ -2.51
ABCA3Q99758 AC004584.2-201ENST00000570407 410 ntBASIC-0.6□□□□□ -2.51
ABCA3Q99758 MIR3192-201ENST00000584920 77 ntBASIC-0.6□□□□□ -2.51
ABCA3Q99758 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
ABCA3Q99758 AL356596.1-201ENST00000624230 379 ntBASIC-0.6□□□□□ -2.51
ABCA3Q99758 SNORD98-201ENST00000636377 67 ntBASIC-0.6□□□□□ -2.51
ABCA3Q99758 CDR1-202ENST00000625883 1485 ntBASIC-0.6□□□□□ -2.51
ABCA3Q99758 RNU4-32P-201ENST00000363404 141 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 SNORA1.1-201ENST00000364671 133 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 MIR1185-1-201ENST00000408598 86 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 AL139824.2-201ENST00000458731 1095 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 RNU6-138P-201ENST00000515952 107 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 RNU4-49P-201ENST00000516080 140 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 SNORA31.10-201ENST00000516482 106 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.61□□□□□ -2.51
ABCA3Q99758 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.61□□□□□ -2.51
ABCA3Q99758 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.61□□□□□ -2.51
ABCA3Q99758 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.61□□□□□ -2.51
ABCA3Q99758 RNU6-545P-201ENST00000362681 104 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 SNORD115-24-201ENST00000363528 82 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 RNA5SP109-201ENST00000391010 116 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.61□□□□□ -2.51
ABCA3Q99758 MTATP6P23-201ENST00000440153 476 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 AL133217.1-201ENST00000450980 425 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 TPT1P7-201ENST00000458300 517 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 RNU6-583P-201ENST00000516012 92 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 RNU6-917P-201ENST00000516294 104 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.61□□□□□ -2.51
ABCA3Q99758 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.61□□□□□ -2.51
ABCA3Q99758 AC005176.2-201ENST00000596933 147 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 AC234772.3-201ENST00000602277 528 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 uc_338.16-201ENST00000621804 95 ntBASIC-0.61□□□□□ -2.51
ABCA3Q99758 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.62□□□□□ -2.51
ABCA3Q99758 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.62□□□□□ -2.51
ABCA3Q99758 RNU2-34P-201ENST00000516534 121 ntBASIC-0.62□□□□□ -2.51
ABCA3Q99758 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.62□□□□□ -2.51
ABCA3Q99758 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.62□□□□□ -2.51
ABCA3Q99758 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.62□□□□□ -2.51
ABCA3Q99758 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.62□□□□□ -2.51
ABCA3Q99758 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.62□□□□□ -2.51
ABCA3Q99758 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.62□□□□□ -2.51
ABCA3Q99758 RNU6-929P-201ENST00000384429 107 ntBASIC-0.63□□□□□ -2.51
ABCA3Q99758 SNORD41-201ENST00000386967 70 ntBASIC-0.63□□□□□ -2.51
ABCA3Q99758 RNU6-817P-201ENST00000391083 104 ntBASIC-0.63□□□□□ -2.51
ABCA3Q99758 AC007283.2-201ENST00000424739 197 ntBASIC-0.63□□□□□ -2.51
ABCA3Q99758 RNU2-46P-201ENST00000517038 113 ntBASIC-0.63□□□□□ -2.51
ABCA3Q99758 AC105185.1-201ENST00000518705 535 ntBASIC-0.63□□□□□ -2.51
ABCA3Q99758 ZNF321P-202ENST00000550843 495 ntBASIC-0.63□□□□□ -2.51
ABCA3Q99758 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms