Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 Y_RNA.44-201ENST00000362676 108 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 Y_RNA.65-201ENST00000362846 100 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 Y_RNA.136-201ENST00000363444 102 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 U3.8-201ENST00000363675 217 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 RNU6-1305P-201ENST00000364353 104 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 RNU6-234P-201ENST00000365229 104 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 DEFA7P-201ENST00000382676 285 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 Y_RNA.418-201ENST00000384029 102 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
LITAFQ99732 AC009963.1-201ENST00000417265 157 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC1.92□□□□□ -2.1
LITAFQ99732 NDUFB4P10-201ENST00000452541 359 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 AL139109.1-201ENST00000455491 297 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 RNU7-14P-201ENST00000459331 62 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 AC003982.1-202ENST00000469928 248 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.92□□□□□ -2.1
LITAFQ99732 RNU6-155P-201ENST00000516347 100 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.92□□□□□ -2.1
LITAFQ99732 MIR4643-201ENST00000577473 78 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 AC037487.3-201ENST00000606668 112 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 BX284668.6-201ENST00000606899 438 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 AL162274.2-201ENST00000614406 332 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 MIR5739-201ENST00000619803 80 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 AL049781.1-201ENST00000623195 3585 ntBASIC1.92□□□□□ -2.1
LITAFQ99732 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC1.92□□□□□ -2.1
LITAFQ99732 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LITAFQ99732 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.92□□□□□ -2.1
LITAFQ99732 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LITAFQ99732 AC092593.1-201ENST00000515413 1815 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
LITAFQ99732 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.91□□□□□ -2.1
LITAFQ99732 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LITAFQ99732 SNORA25.1-201ENST00000362326 128 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 RNU6-545P-201ENST00000362681 104 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 Y_RNA.515-201ENST00000384535 112 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 MIR586-201ENST00000385035 97 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 MIR95-201ENST00000385072 81 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 MIR548B-201ENST00000385247 97 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 FO393413.1-201ENST00000402892 195 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 RNU6-628P-201ENST00000410675 107 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 CYCSP19-201ENST00000411715 316 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 TOMM22P2-201ENST00000430735 237 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 MTCO1P5-201ENST00000433573 344 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 AL161788.1-201ENST00000441805 169 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 AC106707.2-201ENST00000484182 374 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC1.91□□□□□ -2.1
LITAFQ99732 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.91□□□□□ -2.1
LITAFQ99732 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.91□□□□□ -2.1
LITAFQ99732 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC1.91□□□□□ -2.1
LITAFQ99732 RNU2-12P-201ENST00000517216 168 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 AC109329.2-201ENST00000519658 482 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.91□□□□□ -2.1
LITAFQ99732 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC1.91□□□□□ -2.1
LITAFQ99732 MIR6830-201ENST00000636015 70 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
LITAFQ99732 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
LITAFQ99732 AC009487.2-201ENST00000420969 6821 ntBASIC1.91□□□□□ -2.1
LITAFQ99732 Z82209.1-201ENST00000422141 2135 ntBASIC1.9□□□□□ -2.1
LITAFQ99732 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LITAFQ99732 MIR6073-201ENST00000352083 89 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 RNU6-461P-201ENST00000364195 107 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 Y_RNA.269-201ENST00000364685 89 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 RNU6-514P-201ENST00000384208 107 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 MT-TR-201ENST00000387439 65 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 RNU6-220P-201ENST00000390919 107 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 MIR1283-1-201ENST00000408494 87 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 RNU2-14P-201ENST00000411053 191 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.9□□□□□ -2.11
LITAFQ99732 HMGN2P9-201ENST00000476875 229 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 RPS29P26-201ENST00000477483 171 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC1.9□□□□□ -2.11
LITAFQ99732 ATP5EP1-201ENST00000510257 156 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.9□□□□□ -2.11
LITAFQ99732 RNU6-965P-201ENST00000516721 96 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 UBL5P2-201ENST00000583788 219 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 AC006380.1-201ENST00000603598 186 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 AC009779.6-201ENST00000603972 165 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC1.9□□□□□ -2.11
LITAFQ99732 AC092435.3-201ENST00000565538 3654 ntBASIC1.9□□□□□ -2.11
LITAFQ99732 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.9□□□□□ -2.11
LITAFQ99732 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.89□□□□□ -2.11
LITAFQ99732 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LITAFQ99732 RNY1-201ENST00000364228 113 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 RNU6-740P-201ENST00000364734 105 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LITAFQ99732 AL359837.1-201ENST00000381357 287 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 MIR300-201ENST00000401138 83 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 RNU2-32P-201ENST00000411193 191 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 AL513477.1-202ENST00000417061 214 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 Z98949.2-201ENST00000440996 144 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LITAFQ99732 CYCSP35-201ENST00000451978 304 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 CYP2C59P-201ENST00000457790 269 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 RN7SL863P-201ENST00000462370 296 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 AC091959.1-201ENST00000495857 238 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 CKS1BP2-201ENST00000497342 240 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.89□□□□□ -2.11
LITAFQ99732 RNU4-71P-201ENST00000516258 113 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 SNORA27.4-201ENST00000516650 95 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms