Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PHOX2BQ99453 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PHOX2BQ99453 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PHOX2BQ99453 MTND5P18-201ENST00000445624 1801 ntBASIC4.37□□□□□ -1.71
PHOX2BQ99453 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.36□□□□□ -1.71
PHOX2BQ99453 AC006971.1-201ENST00000407916 4486 ntBASIC4.36□□□□□ -1.71
PHOX2BQ99453 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.36□□□□□ -1.71
PHOX2BQ99453 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PHOX2BQ99453 MIR448-201ENST00000362131 111 ntBASIC4.36□□□□□ -1.71
PHOX2BQ99453 RNU6-418P-201ENST00000384035 107 ntBASIC4.36□□□□□ -1.71
PHOX2BQ99453 MIR520G-201ENST00000385064 90 ntBASIC4.36□□□□□ -1.71
PHOX2BQ99453 RNA5SP136-201ENST00000410906 107 ntBASIC4.36□□□□□ -1.71
PHOX2BQ99453 AL031183.1-201ENST00000457667 207 ntBASIC4.36□□□□□ -1.71
PHOX2BQ99453 RNA5SP519-201ENST00000516480 119 ntBASIC4.36□□□□□ -1.71
PHOX2BQ99453 MIR6500-201ENST00000622700 86 ntBASIC4.36□□□□□ -1.71
PHOX2BQ99453 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
PHOX2BQ99453 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.36□□□□□ -1.71
PHOX2BQ99453 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PHOX2BQ99453 AL161912.2-201ENST00000565707 3007 ntBASIC4.36□□□□□ -1.71
PHOX2BQ99453 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PHOX2BQ99453 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PHOX2BQ99453 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PHOX2BQ99453 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PHOX2BQ99453 Y_RNA.116-201ENST00000363292 103 ntBASIC4.35□□□□□ -1.71
PHOX2BQ99453 RNU6-944P-201ENST00000364023 107 ntBASIC4.35□□□□□ -1.71
PHOX2BQ99453 RNU6-1292P-201ENST00000383856 107 ntBASIC4.35□□□□□ -1.71
PHOX2BQ99453 MIR1302-4-201ENST00000408701 150 ntBASIC4.35□□□□□ -1.71
PHOX2BQ99453 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.35□□□□□ -1.71
PHOX2BQ99453 AC018634.1-201ENST00000437554 401 ntBASIC4.35□□□□□ -1.71
PHOX2BQ99453 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.35□□□□□ -1.71
PHOX2BQ99453 AC115115.1-201ENST00000449927 248 ntBASIC4.35□□□□□ -1.71
PHOX2BQ99453 RN7SL429P-201ENST00000479090 223 ntBASIC4.35□□□□□ -1.71
PHOX2BQ99453 RN7SL489P-201ENST00000486185 223 ntBASIC4.35□□□□□ -1.71
PHOX2BQ99453 RN7SL327P-201ENST00000488659 223 ntBASIC4.35□□□□□ -1.71
PHOX2BQ99453 RNU1-95P-201ENST00000516357 160 ntBASIC4.35□□□□□ -1.71
PHOX2BQ99453 Y_RNA.677-201ENST00000516401 85 ntBASIC4.35□□□□□ -1.71
PHOX2BQ99453 RNU1-128P-201ENST00000516704 160 ntBASIC4.35□□□□□ -1.71
PHOX2BQ99453 RN7SL853P-201ENST00000617250 223 ntBASIC4.35□□□□□ -1.71
PHOX2BQ99453 MIR3651-201ENST00000630427 90 ntBASIC4.35□□□□□ -1.71
PHOX2BQ99453 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.35□□□□□ -1.71
PHOX2BQ99453 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PHOX2BQ99453 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.35□□□□□ -1.71
PHOX2BQ99453 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.35□□□□□ -1.71
PHOX2BQ99453 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PHOX2BQ99453 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PHOX2BQ99453 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PHOX2BQ99453 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.35□□□□□ -1.71
PHOX2BQ99453 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PHOX2BQ99453 SNORA5A-201ENST00000384111 134 ntBASIC4.34□□□□□ -1.71
PHOX2BQ99453 MIR128-1-201ENST00000384921 82 ntBASIC4.34□□□□□ -1.71
PHOX2BQ99453 MTCO1P44-201ENST00000441935 243 ntBASIC4.34□□□□□ -1.71
PHOX2BQ99453 BX510359.1-201ENST00000456973 237 ntBASIC4.34□□□□□ -1.71
PHOX2BQ99453 RPS26P28-201ENST00000470806 348 ntBASIC4.34□□□□□ -1.71
PHOX2BQ99453 RN7SL812P-201ENST00000493791 279 ntBASIC4.34□□□□□ -1.71
PHOX2BQ99453 SNORA4.4-201ENST00000515921 135 ntBASIC4.34□□□□□ -1.71
PHOX2BQ99453 RNU6-537P-201ENST00000517277 103 ntBASIC4.34□□□□□ -1.71
PHOX2BQ99453 MIR5582-201ENST00000579697 68 ntBASIC4.34□□□□□ -1.71
PHOX2BQ99453 AC106754.2-201ENST00000623006 233 ntBASIC4.34□□□□□ -1.71
PHOX2BQ99453 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.34□□□□□ -1.72
PHOX2BQ99453 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PHOX2BQ99453 MFSD8-236ENST00000641509 4050 ntBASIC4.34□□□□□ -1.72
PHOX2BQ99453 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
PHOX2BQ99453 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PHOX2BQ99453 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PHOX2BQ99453 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PHOX2BQ99453 Y_RNA.281-201ENST00000364774 94 ntBASIC4.33□□□□□ -1.72
PHOX2BQ99453 RN7SKP284-201ENST00000411002 343 ntBASIC4.33□□□□□ -1.72
PHOX2BQ99453 AC016909.1-201ENST00000415916 166 ntBASIC4.33□□□□□ -1.72
PHOX2BQ99453 SCARNA11.3-201ENST00000517276 130 ntBASIC4.33□□□□□ -1.72
PHOX2BQ99453 AP001486.2-201ENST00000561652 5113 ntBASIC4.33□□□□□ -1.72
PHOX2BQ99453 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PHOX2BQ99453 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PHOX2BQ99453 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PHOX2BQ99453 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.32□□□□□ -1.72
PHOX2BQ99453 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.32□□□□□ -1.72
PHOX2BQ99453 AL133243.3-201ENST00000617415 3004 ntBASIC4.32□□□□□ -1.72
PHOX2BQ99453 Y_RNA.486-201ENST00000384398 107 ntBASIC4.32□□□□□ -1.72
PHOX2BQ99453 MIR1253-201ENST00000408273 105 ntBASIC4.32□□□□□ -1.72
PHOX2BQ99453 RN7SKP57-201ENST00000517248 293 ntBASIC4.32□□□□□ -1.72
PHOX2BQ99453 AC002064.3-201ENST00000623448 346 ntBASIC4.32□□□□□ -1.72
PHOX2BQ99453 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PHOX2BQ99453 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PHOX2BQ99453 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.32□□□□□ -1.72
PHOX2BQ99453 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PHOX2BQ99453 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PHOX2BQ99453 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PHOX2BQ99453 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PHOX2BQ99453 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.31□□□□□ -1.72
PHOX2BQ99453 AL136164.3-201ENST00000624429 3978 ntBASIC4.31□□□□□ -1.72
PHOX2BQ99453 Y_RNA.66-201ENST00000362862 102 ntBASIC4.31□□□□□ -1.72
PHOX2BQ99453 AC093663.1-201ENST00000497190 394 ntBASIC4.31□□□□□ -1.72
PHOX2BQ99453 MRPS36P2-201ENST00000512569 299 ntBASIC4.31□□□□□ -1.72
PHOX2BQ99453 AC099522.1-202ENST00000514718 367 ntBASIC4.31□□□□□ -1.72
PHOX2BQ99453 RNU6-1146P-201ENST00000516282 102 ntBASIC4.31□□□□□ -1.72
PHOX2BQ99453 AC007751.1-201ENST00000529260 376 ntBASIC4.31□□□□□ -1.72
PHOX2BQ99453 AC090115.4-201ENST00000609970 188 ntBASIC4.31□□□□□ -1.72
PHOX2BQ99453 MIR6891-201ENST00000618788 93 ntBASIC4.31□□□□□ -1.72
PHOX2BQ99453 MIR7975-201ENST00000619350 68 ntBASIC4.31□□□□□ -1.72
PHOX2BQ99453 MIR7154-201ENST00000620673 73 ntBASIC4.31□□□□□ -1.72
PHOX2BQ99453 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms