Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC090897.1-201ENST00000580909 226 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 MIR4777-201ENST00000583710 86 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AL355877.2-201ENST00000603670 358 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AC010900.2-201ENST00000604508 210 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AC024581.2-201ENST00000619986 252 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 MIR340-201ENST00000362125 95 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RNU6-1324P-201ENST00000384222 107 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.461-201ENST00000384263 103 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 SNORD45A-201ENST00000384512 84 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 HDGFP1-201ENST00000405943 252 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AL357139.1-201ENST00000407792 426 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.590-201ENST00000410140 107 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 MIR1911-201ENST00000410783 80 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RNA5SP508-201ENST00000411327 119 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 TIMM9P1-201ENST00000436122 256 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AC243772.1-201ENST00000451620 410 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RNU6-1069P-201ENST00000516612 133 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AP001328.1-201ENST00000528550 176 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 MIR4723-201ENST00000585070 81 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AC091805.2-201ENST00000603848 235 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RNU1-15P-201ENST00000353977 144 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RNU6-330P-201ENST00000363015 107 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RNU6-1339P-201ENST00000363574 91 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RNA5SP192-201ENST00000364404 120 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 U3.12-201ENST00000364498 214 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.359-201ENST00000365498 102 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RNU2-36P-201ENST00000410361 191 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RNU2-37P-201ENST00000410695 177 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AC004941.2-201ENST00000427009 228 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 GTF2IP20-201ENST00000431663 360 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 NDUFB1P1-201ENST00000435191 180 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 FAM157B-203ENST00000639350 358 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RNU6-1266P-201ENST00000362794 105 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.371-201ENST00000365591 113 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AC110754.1-201ENST00000399740 601 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.630-201ENST00000411370 108 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AC022018.1-201ENST00000430685 241 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 MICF-203ENST00000432679 129 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RNU6-1170P-201ENST00000515974 106 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RNU5A-7P-201ENST00000515979 116 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RNY4P37-201ENST00000516225 96 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 RNU6-1004P-201ENST00000516584 111 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.705-201ENST00000516862 110 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AC007012.1-201ENST00000567192 175 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AC011494.1-201ENST00000596454 237 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AC073410.2-201ENST00000603240 332 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 AC011890.2-201ENST00000613393 294 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 uc_338.34-201ENST00000617467 174 ntBASIC1.07□□□□□ -2.24
HMCN1Q96RW7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 SNORD116-9-201ENST00000384000 95 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 SNORD116-3-201ENST00000384287 95 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 SNORD116-7-201ENST00000384404 95 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 SNORD116-5-201ENST00000384462 95 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 SNORA80E-201ENST00000384744 137 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AL136133.1-201ENST00000413694 376 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AC098614.2-201ENST00000426040 255 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AL356535.1-201ENST00000440335 398 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AL139109.1-201ENST00000455491 297 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RNU7-143P-201ENST00000516781 65 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RNA5SP106-201ENST00000517274 100 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 MIR4484-201ENST00000582855 83 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 MIR7110-201ENST00000612638 86 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 METTL8-218ENST00000638989 876 ntTSL 5 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 METTL8-219ENST00000640734 726 ntTSL 2 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 MIRLET7A3-201ENST00000362116 74 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RNU6-810P-201ENST00000364001 107 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms