Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC022028.1-201ENST00000412054 408 ntBASIC-1.61□□□□□ -2.67
VPS13AQ96RL7 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.61□□□□□ -2.67
VPS13AQ96RL7 LINC01399-202ENST00000458450 244 ntBASIC-1.61□□□□□ -2.67
VPS13AQ96RL7 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.61□□□□□ -2.67
VPS13AQ96RL7 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC-1.61□□□□□ -2.67
VPS13AQ96RL7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 RNU4-7P-201ENST00000364758 141 ntBASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 AC027644.1-201ENST00000419595 298 ntBASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 AL049734.2-201ENST00000441066 616 ntBASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 AC113398.2-201ENST00000507630 558 ntBASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 RNU6-1256P-201ENST00000516539 103 ntBASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 RNU6-1123P-201ENST00000362347 106 ntBASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 RNU6-83P-201ENST00000384568 112 ntBASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 PCNPP5-201ENST00000452246 481 ntBASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 AC005332.6-201ENST00000613178 446 ntBASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1.62□□□□□ -2.67
VPS13AQ96RL7 AC068533.2-201ENST00000411872 306 ntBASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 SNORA72.1-201ENST00000363485 129 ntBASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 SNORA63C-201ENST00000364578 129 ntBASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 AL031667.1-201ENST00000440222 725 ntBASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 DEFB131D-201ENST00000526803 184 ntBASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 DEFB131C-201ENST00000528817 165 ntBASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 AL357078.3-201ENST00000607528 618 ntBASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 RNU2-48P-201ENST00000410694 191 ntBASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 FRG1KP-201ENST00000623592 341 ntBASIC-1.63□□□□□ -2.67
VPS13AQ96RL7 RNU6-486P-201ENST00000363116 107 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 RNU6-1285P-201ENST00000363480 105 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 MTND1P31-201ENST00000449206 961 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 HSPE1P23-201ENST00000509838 286 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 AC004223.2-201ENST00000590309 544 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 BCRP9-201ENST00000605312 388 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 BX322639.1-202ENST00000423987 2213 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 RNU6-702P-201ENST00000364982 107 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 ELOCP21-201ENST00000412558 336 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 AC016907.1-201ENST00000419483 435 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 RPL26P6-201ENST00000440913 438 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 AC023827.1-201ENST00000569247 97 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 MTND3P19-201ENST00000603825 345 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 AP002826.1-201ENST00000608835 315 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 AC019131.2-201ENST00000609071 870 ntBASIC-1.64□□□□□ -2.67
VPS13AQ96RL7 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 RNU6-431P-201ENST00000383874 107 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 MIR507-201ENST00000385234 94 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 SNORD111-201ENST00000408139 94 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 AC092573.2-201ENST00000434546 243 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 MIR378D2-201ENST00000580636 98 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 MIR5695-201ENST00000579717 85 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 RNU6-369P-201ENST00000362515 102 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 U8.6-201ENST00000364939 135 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 MIR301A-201ENST00000385261 86 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 RNA5SP481-201ENST00000516814 122 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 DEFB131E-201ENST00000532329 154 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 RPL21P9-201ENST00000556149 474 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 DEFB131E-202ENST00000602581 683 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 AL391834.1-201ENST00000609609 560 ntBASIC-1.65□□□□□ -2.67
VPS13AQ96RL7 MTND2P4-201ENST00000445034 1004 ntBASIC-1.66□□□□□ -2.67
VPS13AQ96RL7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-1.66□□□□□ -2.67
VPS13AQ96RL7 SNORD38.3-201ENST00000516599 73 ntBASIC-1.66□□□□□ -2.67
VPS13AQ96RL7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-1.66□□□□□ -2.67
VPS13AQ96RL7 AC144521.1-201ENST00000607148 956 ntBASIC-1.66□□□□□ -2.67
VPS13AQ96RL7 RNY3P11-201ENST00000364153 102 ntBASIC-1.66□□□□□ -2.68
VPS13AQ96RL7 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.66□□□□□ -2.68
VPS13AQ96RL7 AP000533.3-201ENST00000447704 118 ntBASIC-1.66□□□□□ -2.68
VPS13AQ96RL7 MIR4709-201ENST00000577272 72 ntBASIC-1.66□□□□□ -2.68
VPS13AQ96RL7 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.66□□□□□ -2.68
VPS13AQ96RL7 MIR520A-201ENST00000384862 85 ntBASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 MTATP6P30-201ENST00000443540 664 ntBASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 RNU6-803P-201ENST00000516034 102 ntBASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 RNU6-504P-201ENST00000516568 104 ntBASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 MIR4280-201ENST00000582178 76 ntBASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 RNU6-87P-201ENST00000607561 108 ntBASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 MIR501-201ENST00000390204 84 ntBASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 RPS23P5-201ENST00000495419 428 ntBASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 AC097473.1-201ENST00000508142 408 ntBASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 RNU6-479P-201ENST00000516348 105 ntBASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 AC105036.1-201ENST00000566222 271 ntBASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 AC004853.1-201ENST00000604902 698 ntBASIC-1.67□□□□□ -2.68
VPS13AQ96RL7 RNU6-750P-201ENST00000390946 107 ntBASIC-1.67□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms