Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 MIR320A-201ENST00000385302 82 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
VPS35Q96QK1 AC007098.1-201ENST00000420122 367 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 AC108667.1-201ENST00000428618 249 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 C8orf59P1-201ENST00000429930 303 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS35Q96QK1 NFU1P2-201ENST00000448700 469 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 AC016717.1-201ENST00000448918 286 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 RNU7-187P-201ENST00000458985 68 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 RNU6-498P-201ENST00000459468 107 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 AC007215.1-201ENST00000464893 276 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 HMGN2P9-201ENST00000476875 229 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 RPL26P26-201ENST00000480251 434 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS35Q96QK1 Y_RNA.675-201ENST00000516389 149 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 RNA5SP384-201ENST00000516615 116 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.45□□□□□ -2.18
VPS35Q96QK1 AC016957.1-201ENST00000534895 309 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 AC084364.2-201ENST00000546924 395 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 RRN3P3-201ENST00000549207 578 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 AC024909.2-201ENST00000553035 286 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 AC015720.1-201ENST00000565251 277 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 AP000942.3-201ENST00000603702 160 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 AC103591.3-201ENST00000608684 209 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 AC126177.8-201ENST00000618339 1015 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 SCARNA4-201ENST00000629045 128 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 MTND4P5-201ENST00000435821 1374 ntBASIC1.45□□□□□ -2.18
VPS35Q96QK1 U8.1-201ENST00000362843 134 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 SNORA63D-201ENST00000364359 132 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 Y_RNA.373-201ENST00000365600 103 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 MIR548B-201ENST00000385247 97 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 Y_RNA.615-201ENST00000410769 117 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS35Q96QK1 CST2P1-201ENST00000425770 87 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 AL354695.1-201ENST00000427935 228 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS35Q96QK1 JTBP1-201ENST00000441314 247 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 HMGN2P26-201ENST00000463169 339 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 RNU6-948P-201ENST00000516374 107 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS35Q96QK1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS35Q96QK1 ZNF519P2-201ENST00000557032 169 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 SNORA77B-201ENST00000578179 125 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 SNRPGP20-201ENST00000604477 205 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 AC137590.2-201ENST00000619709 240 ntBASIC1.44□□□□□ -2.18
VPS35Q96QK1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VPS35Q96QK1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VPS35Q96QK1 Y_RNA.67-201ENST00000362870 100 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 RNU6-451P-201ENST00000362921 107 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 RNU6-1252P-201ENST00000363054 104 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 RNU6-975P-201ENST00000384296 105 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 RNU6-790P-201ENST00000384479 105 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 MIR487A-201ENST00000385009 80 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 RNU6-360P-201ENST00000390944 104 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 RNU6-174P-201ENST00000410406 106 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 MTCO3P29-201ENST00000432119 779 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 RPL23AP75-201ENST00000491601 451 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS35Q96QK1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS35Q96QK1 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 RNA5SP481-201ENST00000516814 122 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS35Q96QK1 MIR4422-201ENST00000581938 83 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 AL512598.1-201ENST00000610158 273 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.43□□□□□ -2.18
VPS35Q96QK1 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.43□□□□□ -2.18
VPS35Q96QK1 MIR338-201ENST00000636369 67 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 AC100821.1-201ENST00000523153 2479 ntBASIC1.43□□□□□ -2.18
VPS35Q96QK1 RNY3P3-201ENST00000363816 102 ntBASIC1.42□□□□□ -2.18
VPS35Q96QK1 Y_RNA.194-201ENST00000363985 102 ntBASIC1.42□□□□□ -2.18
VPS35Q96QK1 Y_RNA.256-201ENST00000364594 104 ntBASIC1.42□□□□□ -2.18
VPS35Q96QK1 MIR586-201ENST00000385035 97 ntBASIC1.42□□□□□ -2.18
VPS35Q96QK1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
VPS35Q96QK1 MIR320B2-201ENST00000408479 138 ntBASIC1.42□□□□□ -2.18
VPS35Q96QK1 RNU4-62P-201ENST00000410125 130 ntBASIC1.42□□□□□ -2.18
VPS35Q96QK1 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS35Q96QK1 FTH1P12-201ENST00000432137 551 ntBASIC1.42□□□□□ -2.18
VPS35Q96QK1 AC069257.2-201ENST00000441819 155 ntBASIC1.42□□□□□ -2.18
VPS35Q96QK1 FO393415.2-201ENST00000480085 343 ntBASIC1.42□□□□□ -2.18
VPS35Q96QK1 TRBVA-201ENST00000498804 316 ntBASIC1.42□□□□□ -2.18
VPS35Q96QK1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS35Q96QK1 ZNF204P-201ENST00000416749 2397 ntBASIC1.42□□□□□ -2.18
VPS35Q96QK1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
VPS35Q96QK1 AL161722.3-201ENST00000605789 2983 ntBASIC1.41□□□□□ -2.18
VPS35Q96QK1 snoU2-30.2-201ENST00000362805 70 ntBASIC1.41□□□□□ -2.18
VPS35Q96QK1 SNORD50.1-201ENST00000362987 71 ntBASIC1.41□□□□□ -2.18
VPS35Q96QK1 Y_RNA.151-201ENST00000363566 112 ntBASIC1.41□□□□□ -2.18
VPS35Q96QK1 RNU6-1305P-201ENST00000364353 104 ntBASIC1.41□□□□□ -2.18
VPS35Q96QK1 RNU6-95P-201ENST00000384697 107 ntBASIC1.41□□□□□ -2.18
VPS35Q96QK1 AL353572.1-201ENST00000442490 417 ntBASIC1.41□□□□□ -2.18
VPS35Q96QK1 AC074290.1-201ENST00000448883 135 ntBASIC1.41□□□□□ -2.18
VPS35Q96QK1 AC079354.2-201ENST00000453523 154 ntBASIC1.41□□□□□ -2.18
VPS35Q96QK1 RNU7-66P-201ENST00000459469 62 ntBASIC1.41□□□□□ -2.18
VPS35Q96QK1 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS35Q96QK1 AL160236.1-201ENST00000556317 195 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms