Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 CBX3P6-201ENST00000430257 527 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 HMGB3P3-201ENST00000510526 400 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 RNU2-44P-201ENST00000516795 194 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 AC004486.1-201ENST00000546846 233 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 AC113195.1-201ENST00000579952 141 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 MIR3670-2-201ENST00000582974 65 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 MIR5006-201ENST00000583027 110 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 MIR3670-1-201ENST00000584160 65 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 MIR3670-3-201ENST00000584855 65 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 AC005034.5-201ENST00000604219 466 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 AC010999.1-201ENST00000611856 324 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 MIR3670-4-201ENST00000612260 65 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 RNU4-50P-201ENST00000364361 141 ntBASIC2.84□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-26P-201ENST00000383985 107 ntBASIC2.84□□□□□ -1.95
CDK5RAP3Q96JB5 RNU1-52P-201ENST00000384190 164 ntBASIC2.84□□□□□ -1.95
CDK5RAP3Q96JB5 Y_RNA.459-201ENST00000384251 102 ntBASIC2.84□□□□□ -1.95
CDK5RAP3Q96JB5 snosnR66.1-201ENST00000391095 99 ntBASIC2.84□□□□□ -1.95
CDK5RAP3Q96JB5 AC010095.1-201ENST00000443543 144 ntBASIC2.84□□□□□ -1.95
CDK5RAP3Q96JB5 AC010469.2-201ENST00000496412 480 ntBASIC2.84□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-965P-201ENST00000516721 96 ntBASIC2.84□□□□□ -1.95
CDK5RAP3Q96JB5 Y_RNA.715-201ENST00000517082 110 ntBASIC2.84□□□□□ -1.95
CDK5RAP3Q96JB5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.84□□□□□ -1.95
CDK5RAP3Q96JB5 AL390123.1-201ENST00000603216 237 ntBASIC2.84□□□□□ -1.95
CDK5RAP3Q96JB5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.84□□□□□ -1.96
CDK5RAP3Q96JB5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CDK5RAP3Q96JB5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CDK5RAP3Q96JB5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CDK5RAP3Q96JB5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDK5RAP3Q96JB5 RNU1-23P-201ENST00000363361 144 ntBASIC2.83□□□□□ -1.96
CDK5RAP3Q96JB5 Y_RNA.179-201ENST00000363844 90 ntBASIC2.83□□□□□ -1.96
CDK5RAP3Q96JB5 RNU6-926P-201ENST00000384075 107 ntBASIC2.83□□□□□ -1.96
CDK5RAP3Q96JB5 MIR329-1-201ENST00000385028 80 ntBASIC2.83□□□□□ -1.96
CDK5RAP3Q96JB5 MIR95-201ENST00000385072 81 ntBASIC2.83□□□□□ -1.96
CDK5RAP3Q96JB5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.83□□□□□ -1.96
CDK5RAP3Q96JB5 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.83□□□□□ -1.96
CDK5RAP3Q96JB5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.83□□□□□ -1.96
CDK5RAP3Q96JB5 AC136443.5-201ENST00000603741 370 ntBASIC2.83□□□□□ -1.96
CDK5RAP3Q96JB5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.83□□□□□ -1.96
CDK5RAP3Q96JB5 AL078596.1-201ENST00000624856 447 ntBASIC2.83□□□□□ -1.96
CDK5RAP3Q96JB5 U6.92-201ENST00000636464 89 ntBASIC2.83□□□□□ -1.96
CDK5RAP3Q96JB5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDK5RAP3Q96JB5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 RNU1-76P-201ENST00000362903 159 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 RNU6-727P-201ENST00000363592 107 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 RNU6-546P-201ENST00000383991 107 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 RNU6-793P-201ENST00000384233 104 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 Y_RNA.471-201ENST00000384312 102 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 MIR27B-201ENST00000385129 97 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 SNORD78.2-201ENST00000391076 69 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 MIR1252-201ENST00000408861 65 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 SNORD12B-201ENST00000410433 91 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 RNU2-32P-201ENST00000411193 191 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 AC004866.1-201ENST00000411748 78 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 DPH3P2-201ENST00000422618 250 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 AL109933.2-201ENST00000452651 260 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 AL139109.1-201ENST00000455491 297 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 MTND5P22-201ENST00000458380 195 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 AC091179.3-201ENST00000474761 144 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 RNU5F-4P-201ENST00000516581 114 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 RN7SKP49-201ENST00000516675 260 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 SNORA48.11-201ENST00000517015 89 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 AC018630.3-201ENST00000542637 96 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 MZT1P2-201ENST00000604387 248 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 U4atac.1-201ENST00000618345 95 ntBASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
CDK5RAP3Q96JB5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 RNU1-62P-201ENST00000362599 164 ntBASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 Y_RNA.153-201ENST00000363615 91 ntBASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 Y_RNA.380-201ENST00000365663 111 ntBASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 RNU6-1145P-201ENST00000384246 107 ntBASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 Y_RNA.551-201ENST00000384661 102 ntBASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 U8.20-201ENST00000459445 131 ntBASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 AP001486.1-201ENST00000463339 476 ntBASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 RPS23P5-201ENST00000495419 428 ntBASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 Y_RNA.683-201ENST00000516508 93 ntBASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 RNU6-1046P-201ENST00000516538 107 ntBASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 RNU6-1098P-201ENST00000516772 96 ntBASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 RPL17P51-201ENST00000605218 238 ntBASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 SNORD14A-201ENST00000606526 91 ntBASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 MTND5P35-201ENST00000557537 1720 ntBASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CDK5RAP3Q96JB5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms