Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.62□□□□□ -2.15
VMP1Q96GC9 CYCSP49-201ENST00000420810 319 ntBASIC1.62□□□□□ -2.15
VMP1Q96GC9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.62□□□□□ -2.15
VMP1Q96GC9 MTCO1P20-201ENST00000425366 358 ntBASIC1.62□□□□□ -2.15
VMP1Q96GC9 AL645568.3-201ENST00000433683 316 ntBASIC1.62□□□□□ -2.15
VMP1Q96GC9 AL353572.1-201ENST00000442490 417 ntBASIC1.62□□□□□ -2.15
VMP1Q96GC9 RNU7-57P-201ENST00000459540 60 ntBASIC1.62□□□□□ -2.15
VMP1Q96GC9 AC099513.1-201ENST00000490423 301 ntBASIC1.62□□□□□ -2.15
VMP1Q96GC9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.62□□□□□ -2.15
VMP1Q96GC9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.62□□□□□ -2.15
VMP1Q96GC9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.62□□□□□ -2.15
VMP1Q96GC9 AL133215.3-201ENST00000609801 448 ntBASIC1.62□□□□□ -2.15
VMP1Q96GC9 SCARNA4-201ENST00000629045 128 ntBASIC1.62□□□□□ -2.15
VMP1Q96GC9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.62□□□□□ -2.15
VMP1Q96GC9 AC068137.3-201ENST00000639191 341 ntBASIC1.62□□□□□ -2.15
VMP1Q96GC9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.62□□□□□ -2.15
VMP1Q96GC9 MTND5P35-201ENST00000557537 1720 ntBASIC1.61□□□□□ -2.15
VMP1Q96GC9 ZNF204P-201ENST00000416749 2397 ntBASIC1.61□□□□□ -2.15
VMP1Q96GC9 SNORD113-7-201ENST00000363762 77 ntBASIC1.61□□□□□ -2.15
VMP1Q96GC9 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
VMP1Q96GC9 Y_RNA.373-201ENST00000365600 103 ntBASIC1.61□□□□□ -2.15
VMP1Q96GC9 Y_RNA.559-201ENST00000384686 107 ntBASIC1.61□□□□□ -2.15
VMP1Q96GC9 AL627390.1-201ENST00000396055 340 ntBASIC1.61□□□□□ -2.15
VMP1Q96GC9 MIR1253-201ENST00000408273 105 ntBASIC1.61□□□□□ -2.15
VMP1Q96GC9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.61□□□□□ -2.15
VMP1Q96GC9 AC007098.1-201ENST00000420122 367 ntBASIC1.61□□□□□ -2.15
VMP1Q96GC9 AC027119.1-201ENST00000440877 241 ntBASIC1.61□□□□□ -2.15
VMP1Q96GC9 MIR3683-201ENST00000580847 82 ntBASIC1.61□□□□□ -2.15
VMP1Q96GC9 MIR502-201ENST00000606349 86 ntBASIC1.61□□□□□ -2.15
VMP1Q96GC9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.61□□□□□ -2.15
VMP1Q96GC9 AC006001.4-201ENST00000622243 395 ntBASIC1.61□□□□□ -2.15
VMP1Q96GC9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.61□□□□□ -2.15
VMP1Q96GC9 RNU6-203P-201ENST00000384038 104 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 SNORD26-201ENST00000384147 75 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 RNU6-790P-201ENST00000384479 105 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 RNU6-331P-201ENST00000384724 107 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 AL161935.2-201ENST00000414627 60 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 RPL30P13-201ENST00000418873 348 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.6□□□□□ -2.15
VMP1Q96GC9 NDUFA5P4-201ENST00000436704 385 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 HMGN2P34-201ENST00000437647 269 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 AL135790.2-201ENST00000437701 267 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 RNU6-1281P-201ENST00000516223 105 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 AC016957.1-201ENST00000534895 309 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.6□□□□□ -2.15
VMP1Q96GC9 MIR4255-201ENST00000579351 72 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 MIR3937-201ENST00000580135 106 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 MIR3124-201ENST00000582636 67 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 AL162413.1-201ENST00000603198 110 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 DISC2.1-201ENST00000612827 205 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 AL078596.1-201ENST00000624856 447 ntBASIC1.6□□□□□ -2.15
VMP1Q96GC9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
VMP1Q96GC9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
VMP1Q96GC9 Y_RNA.194-201ENST00000363985 102 ntBASIC1.59□□□□□ -2.15
VMP1Q96GC9 RNU6-417P-201ENST00000384712 107 ntBASIC1.59□□□□□ -2.15
VMP1Q96GC9 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.59□□□□□ -2.15
VMP1Q96GC9 MRPL35P1-201ENST00000404272 572 ntBASIC1.59□□□□□ -2.15
VMP1Q96GC9 RNU6-57P-201ENST00000411348 103 ntBASIC1.59□□□□□ -2.15
VMP1Q96GC9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.59□□□□□ -2.15
VMP1Q96GC9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.59□□□□□ -2.15
VMP1Q96GC9 RNU6-344P-201ENST00000516635 111 ntBASIC1.59□□□□□ -2.15
VMP1Q96GC9 RNA5SP54-201ENST00000516951 92 ntBASIC1.59□□□□□ -2.15
VMP1Q96GC9 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.59□□□□□ -2.15
VMP1Q96GC9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.59□□□□□ -2.15
VMP1Q96GC9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.59□□□□□ -2.15
VMP1Q96GC9 SUB1P3-201ENST00000564581 315 ntBASIC1.59□□□□□ -2.15
VMP1Q96GC9 MIR4709-201ENST00000577272 72 ntBASIC1.59□□□□□ -2.15
VMP1Q96GC9 AC015688.6-201ENST00000577737 104 ntBASIC1.59□□□□□ -2.15
VMP1Q96GC9 AC010525.2-201ENST00000590920 195 ntBASIC1.59□□□□□ -2.15
VMP1Q96GC9 AC103591.3-201ENST00000608684 209 ntBASIC1.59□□□□□ -2.15
VMP1Q96GC9 MIR8081-201ENST00000611533 95 ntBASIC1.59□□□□□ -2.15
VMP1Q96GC9 RNU4-24P-201ENST00000364565 139 ntBASIC1.58□□□□□ -2.16
VMP1Q96GC9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.58□□□□□ -2.16
VMP1Q96GC9 RPS27P16-201ENST00000425758 201 ntBASIC1.58□□□□□ -2.16
VMP1Q96GC9 RNU7-187P-201ENST00000458985 68 ntBASIC1.58□□□□□ -2.16
VMP1Q96GC9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.58□□□□□ -2.16
VMP1Q96GC9 AC019176.1-201ENST00000518519 225 ntBASIC1.58□□□□□ -2.16
VMP1Q96GC9 AP003465.2-201ENST00000602571 373 ntBASIC1.58□□□□□ -2.16
VMP1Q96GC9 AC080013.6-201ENST00000606185 215 ntBASIC1.58□□□□□ -2.16
VMP1Q96GC9 AL353997.5-201ENST00000618886 171 ntBASIC1.58□□□□□ -2.16
VMP1Q96GC9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
VMP1Q96GC9 RNA5SP190-201ENST00000365222 118 ntBASIC1.57□□□□□ -2.16
VMP1Q96GC9 RNU6-483P-201ENST00000384088 108 ntBASIC1.57□□□□□ -2.16
VMP1Q96GC9 U8.10-201ENST00000384260 133 ntBASIC1.57□□□□□ -2.16
VMP1Q96GC9 SNORA67.2-201ENST00000384300 149 ntBASIC1.57□□□□□ -2.16
VMP1Q96GC9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
VMP1Q96GC9 RNU6-482P-201ENST00000391068 107 ntBASIC1.57□□□□□ -2.16
VMP1Q96GC9 AL590002.1-201ENST00000406554 418 ntBASIC1.57□□□□□ -2.16
VMP1Q96GC9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.57□□□□□ -2.16
VMP1Q96GC9 PCMTD1P1-201ENST00000455560 355 ntBASIC1.57□□□□□ -2.16
VMP1Q96GC9 RPS26P45-201ENST00000471748 340 ntBASIC1.57□□□□□ -2.16
VMP1Q96GC9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.57□□□□□ -2.16
VMP1Q96GC9 AC019235.1-201ENST00000503847 207 ntBASIC1.57□□□□□ -2.16
VMP1Q96GC9 RNU6-1198P-201ENST00000516904 67 ntBASIC1.57□□□□□ -2.16
VMP1Q96GC9 AC005668.1-201ENST00000571142 476 ntBASIC1.57□□□□□ -2.16
VMP1Q96GC9 AC104581.2-201ENST00000572227 430 ntBASIC1.57□□□□□ -2.16
VMP1Q96GC9 AL078604.3-201ENST00000615580 211 ntBASIC1.57□□□□□ -2.16
VMP1Q96GC9 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.57□□□□□ -2.16
VMP1Q96GC9 snoZ196.1-201ENST00000625269 89 ntBASIC1.57□□□□□ -2.16
VMP1Q96GC9 ZNF72P-201ENST00000425869 1908 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms