Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 RNU6-727P-201ENST00000363592 107 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 SNORD32B-201ENST00000364460 84 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 RNA5SP240-201ENST00000365355 128 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 RNU6-20P-201ENST00000384106 107 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 RNU6-1310P-201ENST00000384153 107 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 AL590004.2-201ENST00000404787 371 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 RNU6-121P-201ENST00000410525 99 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 AL513477.1-202ENST00000417061 214 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 AC005002.2-201ENST00000438228 269 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 IFNA11P-201ENST00000446352 526 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 AC098869.1-201ENST00000481627 292 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 SEPT14P8-201ENST00000508026 178 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 RNU5F-4P-201ENST00000516581 114 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 RRN3P3-201ENST00000549207 578 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 AC018448.1-201ENST00000552843 316 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 ZNF861P-201ENST00000588126 639 ntBASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CTHRC1Q96CG8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
CTHRC1Q96CG8 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
CTHRC1Q96CG8 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CTHRC1Q96CG8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CTHRC1Q96CG8 Y_RNA.105-201ENST00000363182 111 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 SNORD113-8-201ENST00000363497 74 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 Y_RNA.188-201ENST00000363952 111 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 Y_RNA.510-201ENST00000384511 114 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 RNA5SP475-201ENST00000410568 110 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 RNU2-25P-201ENST00000411041 191 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 RPL19P1-201ENST00000411635 428 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.58□□□□□ -2
CTHRC1Q96CG8 RPL21P38-201ENST00000418090 167 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 RPL39P40-201ENST00000445481 146 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 RNU6-625P-201ENST00000459412 107 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 RPL26P26-201ENST00000480251 434 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 Y_RNA.668-201ENST00000516233 93 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 RNA5SP367-201ENST00000516557 118 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.58□□□□□ -2
CTHRC1Q96CG8 AK6P2-201ENST00000549020 471 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.58□□□□□ -2
CTHRC1Q96CG8 AC005176.2-201ENST00000596933 147 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 AL713866.2-201ENST00000603579 219 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 AC011373.1-201ENST00000607270 237 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.58□□□□□ -2
CTHRC1Q96CG8 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.58□□□□□ -2
CTHRC1Q96CG8 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.58□□□□□ -2
CTHRC1Q96CG8 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.58□□□□□ -2
CTHRC1Q96CG8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CTHRC1Q96CG8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CTHRC1Q96CG8 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
CTHRC1Q96CG8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 RNU1-72P-201ENST00000362976 153 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 RNU6-961P-201ENST00000363893 105 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 SNORA72.2-201ENST00000365028 127 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 RNU6-472P-201ENST00000384299 107 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 RNU6-1274P-201ENST00000384557 107 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 RNU6-21P-201ENST00000384710 107 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 MT-TW-201ENST00000387382 68 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 MT-TG-201ENST00000387429 68 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 AL138827.1-201ENST00000402666 306 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 FO393413.1-201ENST00000402892 195 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 RNU2-63P-201ENST00000410792 194 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 RPL23AP36-201ENST00000413895 458 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 AL161788.1-201ENST00000441805 169 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 AC090515.1-201ENST00000465295 476 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 RNU6-107P-201ENST00000516643 102 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 RNU7-110P-201ENST00000516891 62 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.57□□□□□ -2
CTHRC1Q96CG8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.57□□□□□ -2
CTHRC1Q96CG8 AC079600.2-201ENST00000550076 130 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.57□□□□□ -2
CTHRC1Q96CG8 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.57□□□□□ -2
CTHRC1Q96CG8 ELOCP29-201ENST00000588193 334 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 SNORD113-5-201ENST00000607261 78 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 AL357075.2-201ENST00000614906 189 ntBASIC2.57□□□□□ -2
CTHRC1Q96CG8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.57□□□□□ -2
CTHRC1Q96CG8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.57□□□□□ -2
CTHRC1Q96CG8 AC010615.1-201ENST00000594254 1764 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 Z82209.1-201ENST00000422141 2135 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 Y_RNA.84-201ENST00000363011 104 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 Y_RNA.476-201ENST00000384347 108 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 Y_RNA.483-201ENST00000384380 101 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.56□□□□□ -2
CTHRC1Q96CG8 Y_RNA.602-201ENST00000410535 92 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 RNA5SP21-201ENST00000410917 96 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 AC087499.2-201ENST00000432861 149 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 AC105272.1-201ENST00000438604 198 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.56□□□□□ -2
CTHRC1Q96CG8 SNORD127-201ENST00000458892 86 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 RNU6-1132P-201ENST00000459214 107 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 268.7 ms