Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC096531.1-201ENST00000419107 107 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.11□□□□□ -2.39
TTC28Q96AY4 AC073261.1-201ENST00000429409 121 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 HMGN2P34-201ENST00000437647 269 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 AP000542.1-201ENST00000448473 371 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 RPL30P15-201ENST00000457129 321 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 BET1P1-201ENST00000482276 359 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.11□□□□□ -2.39
TTC28Q96AY4 RNU6-1225P-201ENST00000516336 65 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 AP003716.2-201ENST00000528260 108 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 AP002453.2-201ENST00000533503 320 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.11□□□□□ -2.39
TTC28Q96AY4 MIR4709-201ENST00000577272 72 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 MIR4436A-201ENST00000585278 85 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.11□□□□□ -2.39
TTC28Q96AY4 AC021506.2-201ENST00000612354 169 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 MIR8064-201ENST00000612863 90 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 SEPT14P17-201ENST00000617978 177 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 MTND5P42-201ENST00000637720 498 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 MTND5P33-201ENST00000571250 1450 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 RNY3P13-201ENST00000365542 102 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 AC092423.1-201ENST00000430165 186 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 CETN4P-201ENST00000432407 469 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 MTCO3P43-201ENST00000440974 771 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 ART2BP-201ENST00000453501 499 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 AC007547.1-201ENST00000462177 490 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 RN7SKP19-201ENST00000516016 252 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 Y_RNA.687-201ENST00000516558 91 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 MTND1P36-201ENST00000522384 936 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AL391994.1-201ENST00000254724 282 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
TTC28Q96AY4 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 RNU4-15P-201ENST00000362613 141 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 RNU6-236P-201ENST00000363886 106 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 RNY3P11-201ENST00000364153 102 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 RNA5SP109-201ENST00000391010 116 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 RNU6-817P-201ENST00000391083 104 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 RNU2-3P-201ENST00000410144 191 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.1□□□□□ -2.39
TTC28Q96AY4 RPS26P5-201ENST00000418544 335 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 MTND4P20-201ENST00000424125 869 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AC244670.1-201ENST00000436879 112 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 RPS29P15-201ENST00000458329 171 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AC130509.1-201ENST00000464158 433 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AL049829.1-201ENST00000465411 156 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AC002350.1-201ENST00000490759 375 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.1□□□□□ -2.39
TTC28Q96AY4 RNU2-12P-201ENST00000517216 168 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.1□□□□□ -2.39
TTC28Q96AY4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.1□□□□□ -2.39
TTC28Q96AY4 SNORA59B-202ENST00000578183 701 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AC091135.1-201ENST00000585943 307 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AC174048.1-201ENST00000603389 144 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
TTC28Q96AY4 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.1□□□□□ -2.39
TTC28Q96AY4 MIR140-201ENST00000385282 100 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 RPL39P38-201ENST00000467018 153 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 SUMO2P5-201ENST00000506790 245 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AC027338.1-201ENST00000514840 825 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 Y_RNA.704-201ENST00000516851 102 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 RNA5SP106-201ENST00000517274 100 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 MTND2P7-201ENST00000521337 640 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 MIR5695-201ENST00000579717 85 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AC090897.1-201ENST00000580909 226 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 Z98751.3-201ENST00000604447 521 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AC018889.1-201ENST00000605372 397 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AC022893.3-201ENST00000607665 437 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AC023158.2-201ENST00000614876 543 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 MIR8054-201ENST00000620877 86 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AC103706.2-201ENST00000638080 240 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 U4.7-201ENST00000638126 106 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 AC006927.4-201ENST00000639187 543 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 MTND4P16-201ENST00000466108 1367 ntBASIC0.1□□□□□ -2.39
TTC28Q96AY4 Y_RNA.10-201ENST00000362371 110 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 Y_RNA.363-201ENST00000365529 113 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 RNU6-969P-201ENST00000383900 105 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 RNU6-393P-201ENST00000384475 107 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 MIR558-201ENST00000384920 94 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 MTCYBP2-201ENST00000407745 171 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.09□□□□□ -2.39
TTC28Q96AY4 AL031779.1-201ENST00000415663 330 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 AC002429.1-201ENST00000437672 148 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 AL445193.1-201ENST00000441183 141 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.09□□□□□ -2.39
TTC28Q96AY4 MTND2P30-201ENST00000456663 382 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 RNU7-21P-201ENST00000459430 62 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.09□□□□□ -2.39
TTC28Q96AY4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.09□□□□□ -2.39
TTC28Q96AY4 RN7SKP287-201ENST00000516546 266 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 SNORA43.2-201ENST00000516652 128 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.09□□□□□ -2.39
TTC28Q96AY4 AL353778.1-201ENST00000603149 408 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 CTHRC1P1-201ENST00000605383 469 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 LARP7P1-201ENST00000605576 316 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 AL451064.1-201ENST00000607718 471 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 AC063943.3-201ENST00000615562 356 ntBASIC0.09□□□□□ -2.39
TTC28Q96AY4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.09□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms