Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.59□□□□□ -2.15
LHX4Q969G2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.59□□□□□ -2.15
LHX4Q969G2 HSBP1P1-201ENST00000555205 166 ntBASIC1.59□□□□□ -2.15
LHX4Q969G2 MIR4790-201ENST00000577799 79 ntBASIC1.59□□□□□ -2.15
LHX4Q969G2 SNRPGP20-201ENST00000604477 205 ntBASIC1.59□□□□□ -2.15
LHX4Q969G2 BNIP3P10-201ENST00000605360 577 ntBASIC1.59□□□□□ -2.15
LHX4Q969G2 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.59□□□□□ -2.15
LHX4Q969G2 AC084782.3-201ENST00000612282 578 ntBASIC1.59□□□□□ -2.15
LHX4Q969G2 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.59□□□□□ -2.15
LHX4Q969G2 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.59□□□□□ -2.15
LHX4Q969G2 ZNF204P-201ENST00000416749 2397 ntBASIC1.59□□□□□ -2.16
LHX4Q969G2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.59□□□□□ -2.16
LHX4Q969G2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.58□□□□□ -2.16
LHX4Q969G2 ZNF355P-201ENST00000427301 3216 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LHX4Q969G2 MIR32-201ENST00000384965 70 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 RNU6-510P-201ENST00000391239 108 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 RNU6-174P-201ENST00000410406 106 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 Y_RNA.619-201ENST00000410951 90 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.58□□□□□ -2.16
LHX4Q969G2 AC243428.1-201ENST00000421099 264 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 AL139396.1-201ENST00000421137 167 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 HSPE1P21-201ENST00000438283 308 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.58□□□□□ -2.16
LHX4Q969G2 HMGN2P9-201ENST00000476875 229 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.58□□□□□ -2.16
LHX4Q969G2 AC027575.1-201ENST00000481064 460 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.58□□□□□ -2.16
LHX4Q969G2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.58□□□□□ -2.16
LHX4Q969G2 AC097473.1-201ENST00000508142 408 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 AC067942.3-201ENST00000512025 362 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 RNA5SP54-201ENST00000516951 92 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 RNU6-856P-201ENST00000516959 98 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 RNU1-54P-201ENST00000517181 120 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 SUMO2P18-201ENST00000518873 252 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.58□□□□□ -2.16
LHX4Q969G2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.58□□□□□ -2.16
LHX4Q969G2 RRN3P3-201ENST00000549207 578 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 AC110588.1-201ENST00000559699 137 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.58□□□□□ -2.16
LHX4Q969G2 MIR4742-201ENST00000581069 85 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 MIR4524B-201ENST00000581569 115 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 MIR4753-201ENST00000585119 83 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 AC011494.1-201ENST00000596454 237 ntBASIC1.58□□□□□ -2.16
LHX4Q969G2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.58□□□□□ -2.16
LHX4Q969G2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
LHX4Q969G2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LHX4Q969G2 AL159152.1-201ENST00000635019 2587 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 RNU6-1059P-201ENST00000363752 98 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 RNU6-418P-201ENST00000384035 107 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 MIR153-2-201ENST00000385225 87 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 MIR320B2-201ENST00000408479 138 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 USP9YP30-201ENST00000430729 455 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.57□□□□□ -2.16
LHX4Q969G2 AC112492.4-201ENST00000456549 352 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 snoU13.30-201ENST00000458951 104 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 RPL30P10-201ENST00000488148 337 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 RPL23AP63-201ENST00000498752 471 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 AC108210.2-201ENST00000503681 201 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 MTND5P5-201ENST00000503764 376 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.57□□□□□ -2.16
LHX4Q969G2 RNU2-34P-201ENST00000516534 121 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 RNU6-548P-201ENST00000517083 115 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 MTND4LP26-201ENST00000518144 282 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.57□□□□□ -2.16
LHX4Q969G2 CBX3P4-201ENST00000538909 354 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.57□□□□□ -2.16
LHX4Q969G2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.57□□□□□ -2.16
LHX4Q969G2 SUB1P4-201ENST00000566062 339 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 DEFB122-202ENST00000569013 197 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 AC010900.2-201ENST00000604508 210 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 AC083806.3-201ENST00000614016 455 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 MIR6128-201ENST00000615528 109 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 U6atac.1-201ENST00000616025 117 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.57□□□□□ -2.16
LHX4Q969G2 AL133216.2-202ENST00000634512 349 ntBASIC1.57□□□□□ -2.16
LHX4Q969G2 Y_RNA.319-201ENST00000365138 92 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 Y_RNA.533-201ENST00000384596 114 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 MIR586-201ENST00000385035 97 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 U8.13-201ENST00000390842 128 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 AL356776.1-201ENST00000406574 447 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 Y_RNA.599-201ENST00000410489 109 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.56□□□□□ -2.16
LHX4Q969G2 HMGB1P18-201ENST00000438801 619 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 ATP5J2P3-201ENST00000451550 258 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 SNORD5.1-201ENST00000458800 75 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 snoU13.23-201ENST00000458863 104 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 Y_RNA.682-201ENST00000516457 100 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 AC027288.2-201ENST00000553028 243 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 MIR3122-201ENST00000577243 73 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 AC012493.3-201ENST00000604494 112 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 AC092794.1-201ENST00000612734 582 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 AC008873.1-201ENST00000625051 138 ntBASIC1.56□□□□□ -2.16
LHX4Q969G2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LHX4Q969G2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LHX4Q969G2 Y_RNA.72-201ENST00000362894 103 ntBASIC1.55□□□□□ -2.16
LHX4Q969G2 RNU6-245P-201ENST00000384020 107 ntBASIC1.55□□□□□ -2.16
LHX4Q969G2 RNU6-842P-201ENST00000384269 107 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms