Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC006504.8-201ENST00000621046 635 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 Y_RNA.6-201ENST00000362350 114 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 SNORD114-27-201ENST00000363766 70 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 RNU6-128P-201ENST00000383976 107 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 RNA5SP118-201ENST00000410385 109 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 Y_RNA.599-201ENST00000410489 109 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 CYCSP48-201ENST00000417124 323 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 RPL30P4-201ENST00000429309 333 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 NFU1P2-201ENST00000448700 469 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 TRBVA-201ENST00000498804 316 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 SNORA4.4-201ENST00000515921 135 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 CYP3A137P-201ENST00000562436 69 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 MIR1273G-201ENST00000577677 100 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 SNORA59B-202ENST00000578183 701 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 FGF7P1-201ENST00000582820 288 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 AL121757.2-201ENST00000611223 313 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 RNU4-38P-201ENST00000364472 129 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 RNU4-42P-201ENST00000364738 142 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 MIR218-1-201ENST00000384999 110 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 MIR514A2-201ENST00000385131 88 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 MIR514A3-201ENST00000385132 88 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 RNU6-908P-201ENST00000410160 94 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 VN1R36P-201ENST00000414936 291 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 MTATP6P13-201ENST00000438531 667 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 SNORD5.1-201ENST00000458800 75 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 FAM206BP-201ENST00000510179 541 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 RNU6-586P-201ENST00000517265 104 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 AP005639.2-201ENST00000527592 928 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 MRPS36P4-201ENST00000534436 298 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 MIR4742-201ENST00000581069 85 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 AC009248.2-201ENST00000619826 254 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 AC009033.1-201ENST00000624279 431 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 MIR3688-2-201ENST00000636963 87 ntBASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SHROOM3Q8TF72 RNU6-227P-201ENST00000362865 103 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 RNA5SP457-201ENST00000363657 124 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 RNU6-378P-201ENST00000384324 107 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AL512604.1-201ENST00000404812 257 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 MTCO3P29-201ENST00000432119 779 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 RPL39P29-201ENST00000447779 157 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 FGF7P6-202ENST00000451282 293 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 RNU6-864P-201ENST00000516256 108 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 RNU6-256P-201ENST00000516747 97 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AC107953.1-201ENST00000522216 297 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AC118273.2-201ENST00000532092 465 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 SCOCP1-201ENST00000554676 349 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AP001836.1-201ENST00000604675 523 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AL020996.3-201ENST00000606617 222 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 TCL6_2.1-201ENST00000615162 119 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AC100810.6-201ENST00000638068 285 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AC009541.1-201ENST00000438279 2662 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 RNU6-546P-201ENST00000383991 107 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 RNU6-843P-201ENST00000384454 104 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 Y_RNA.504-201ENST00000384481 104 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 Y_RNA.533-201ENST00000384596 114 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 SNORA40.6-201ENST00000391153 128 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 OR2AQ1P-201ENST00000451972 200 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AC016632.1-201ENST00000503994 196 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AC022616.8-201ENST00000533569 253 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 CYP4A27P-201ENST00000567218 190 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 AC005668.1-201ENST00000571142 476 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 MIR3126-201ENST00000577443 74 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 MIR4529-201ENST00000578110 78 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 MIR3923-201ENST00000579521 83 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 U6atac.1-201ENST00000616025 117 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 U4atac.1-201ENST00000618345 95 ntBASIC1.17□□□□□ -2.22
SHROOM3Q8TF72 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms