Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC022306.2-201ENST00000617563 647 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 AC005562.2-201ENST00000618264 111 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 AC137590.2-201ENST00000619709 240 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 AL691447.3-201ENST00000635020 330 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 TPTEP1-208ENST00000636884 213 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 AC092881.1-201ENST00000638218 2733 ntBASIC1.49□□□□□ -2.17
CCDC71LQ8N9Z2 LINC02555-201ENST00000563933 1951 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 ZNF204P-201ENST00000416749 2397 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 MIR340-201ENST00000362125 95 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 Y_RNA.88-201ENST00000363029 99 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 Y_RNA.332-201ENST00000365271 113 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 RNU6-596P-201ENST00000365395 98 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 U8.10-201ENST00000384260 133 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 RNU6-541P-201ENST00000384709 110 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 Y_RNA.594-201ENST00000410373 140 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 RPS26P42-201ENST00000413485 326 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 OOSP1P1-201ENST00000423265 274 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 AL445305.1-201ENST00000432577 575 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 AC004386.2-201ENST00000441858 148 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 AC096638.1-201ENST00000444678 216 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 snoU13.30-201ENST00000458951 104 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 RNU1-98P-201ENST00000458992 160 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 RPL7P42-201ENST00000481005 679 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 AC026782.1-201ENST00000512952 449 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 DEFB131C-201ENST00000528817 165 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 CBX3P8-201ENST00000532412 525 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 MIR5696-201ENST00000578474 85 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 MIR4801-201ENST00000582704 82 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 AC011494.1-201ENST00000596454 237 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 PISRT1.1-201ENST00000616930 107 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 AC064859.1-201ENST00000624741 174 ntBASIC1.48□□□□□ -2.17
CCDC71LQ8N9Z2 RNU6-545P-201ENST00000362681 104 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 Y_RNA.166-201ENST00000363730 102 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 SNORA67.3-201ENST00000384366 140 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 Y_RNA.482-201ENST00000384377 111 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 RNA5SP425-201ENST00000410336 112 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 AC123900.1-201ENST00000420390 96 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 AC243428.1-201ENST00000421099 264 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 MTND2P29-201ENST00000438595 412 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 MTND3P10-201ENST00000450967 341 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 MTCO3P8-201ENST00000453691 755 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 RPL30P10-201ENST00000488148 337 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 AC091544.4-201ENST00000555268 342 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 AC009229.3-201ENST00000608056 282 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 TCL6_2.1-201ENST00000615162 119 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 ZNF299P-201ENST00000406845 1804 ntBASIC1.47□□□□□ -2.17
CCDC71LQ8N9Z2 RNU1-76P-201ENST00000362903 159 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 SNORA72.1-201ENST00000363485 129 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-593P-201ENST00000364716 112 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 Y_RNA.405-201ENST00000383979 100 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 Y_RNA.451-201ENST00000384200 100 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 Y_RNA.524-201ENST00000384564 100 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 Y_RNA.561-201ENST00000384694 100 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-331P-201ENST00000384724 107 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 MIR320B2-201ENST00000408479 138 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 RNU4-14P-201ENST00000410858 122 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-1304P-201ENST00000411374 106 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 MTCO3P29-201ENST00000432119 779 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 AC007215.1-201ENST00000464893 276 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 TRBV12-1-201ENST00000479785 344 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 RNU7-175P-201ENST00000515915 61 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 Y_RNA.708-201ENST00000516950 96 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 AL590705.4-201ENST00000532209 134 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 AC026470.2-201ENST00000561492 181 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 SNRPGP20-201ENST00000604477 205 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 RPL17P51-201ENST00000605218 238 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 AC016727.1-205ENST00000605437 569 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 AL355073.2-201ENST00000612106 557 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 AL359757.2-201ENST00000624309 274 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 AC099654.5-201ENST00000636479 350 ntBASIC1.46□□□□□ -2.18
CCDC71LQ8N9Z2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 Y_RNA.132-201ENST00000363421 102 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-595P-201ENST00000363944 107 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 SNORD48-201ENST00000364953 64 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 SNORD31B-201ENST00000364977 69 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 Y_RNA.319-201ENST00000365138 92 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 Y_RNA.404-201ENST00000383978 102 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms