Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 MIR586-201ENST00000385035 97 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 RNA5SP109-201ENST00000391010 116 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 RNU11-5P-201ENST00000391216 129 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 RNU6-903P-201ENST00000391270 109 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 MIR320B2-201ENST00000408479 138 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 U8.21-201ENST00000459536 136 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 RNU6-323P-201ENST00000521915 107 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 MIR4661-201ENST00000582720 75 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 AC146944.4-201ENST00000602697 718 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 SNRPGP20-201ENST00000604477 205 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 AL021879.1-201ENST00000611756 288 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 AC021506.2-201ENST00000612354 169 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 AC068792.1-201ENST00000621354 417 ntBASIC0.73□□□□□ -2.29
ZIC4Q8N9L1 RNU6-1120P-201ENST00000362988 108 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 Y_RNA.191-201ENST00000363972 113 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 Y_RNA.201-201ENST00000364052 96 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 RNY3P10-201ENST00000384764 102 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 RNU6-1031P-201ENST00000384773 107 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 MIR520E-201ENST00000384867 87 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 RN7SKP200-201ENST00000410564 320 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 RNU6-248P-201ENST00000410720 107 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 CETN4P-201ENST00000432407 469 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 RPL39P5-202ENST00000512505 151 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 AC025465.4-201ENST00000513422 638 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 SNORA31.4-201ENST00000516049 129 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 RNU1-142P-201ENST00000516682 145 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 HIF1AP1-201ENST00000553642 175 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 AC211469.2-201ENST00000605461 205 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 AC072046.2-201ENST00000618366 268 ntBASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
ZIC4Q8N9L1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 RNU4-21P-201ENST00000362802 126 ntBASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 RNU5B-2P-201ENST00000363036 113 ntBASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 Y_RNA.287-201ENST00000364853 94 ntBASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 RNU6-1286P-201ENST00000383871 107 ntBASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 SNORD73A-201ENST00000386062 65 ntBASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 RNA5SP467-201ENST00000391274 118 ntBASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 RNU6-57P-201ENST00000411348 103 ntBASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 POLR2J4-204ENST00000418424 324 ntBASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 AC008134.1-201ENST00000420943 193 ntBASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 MTCO3P8-201ENST00000453691 755 ntBASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 RNU7-57P-201ENST00000459540 60 ntBASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 RNU6-165P-201ENST00000517170 99 ntBASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 AC025449.1-201ENST00000603896 529 ntBASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 AL050303.3-201ENST00000613704 284 ntBASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 AC007494.3-201ENST00000624660 743 ntBASIC0.71□□□□□ -2.3
ZIC4Q8N9L1 SNORD114-2-201ENST00000363953 78 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 MIR19B1-201ENST00000384829 87 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 RNA5SP247-201ENST00000411181 105 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 MTATP6P18-201ENST00000417994 673 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 AL365203.2-201ENST00000423444 196 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 RAB28P5-201ENST00000427490 651 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 MTND3P9-201ENST00000429526 346 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 RPS29P27-201ENST00000463711 170 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 SRRM1P2-201ENST00000464531 1192 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 AC103851.1-201ENST00000506833 274 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 RNU6-1069P-201ENST00000516612 133 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 MTND4P7-201ENST00000523876 130 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 TPRKBP2-201ENST00000565969 475 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 MIR3913-1-201ENST00000577744 102 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 MIR3915-201ENST00000578518 97 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 MIR4452-201ENST00000583004 71 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 FAM106DP-201ENST00000586416 501 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 AC097065.2-201ENST00000608159 533 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 AL359075.3-201ENST00000613288 217 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 uc_338.34-201ENST00000617467 174 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 AL078596.1-201ENST00000624856 447 ntBASIC0.7□□□□□ -2.3
ZIC4Q8N9L1 AC018630.2-201ENST00000534866 2403 ntBASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 Y_RNA.238-201ENST00000364441 102 ntBASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 MT-TH-201ENST00000387441 69 ntBASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 RNA5SP219-201ENST00000390940 113 ntBASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.69□□□□□ -2.3
ZIC4Q8N9L1 AC013410.2-201ENST00000422627 201 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms