Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 SNORA53-201ENST00000391141 249 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 AL033519.2-201ENST00000403958 392 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 RNA5SP274-201ENST00000410484 108 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 AC012306.1-201ENST00000423267 114 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 AL161651.1-201ENST00000440882 223 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 AC007215.1-201ENST00000464893 276 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 RPL30P12-201ENST00000474666 353 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 RNU5F-8P-201ENST00000515941 111 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 RNU6-966P-201ENST00000516479 104 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 RNU7-110P-201ENST00000516891 62 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 RNU6-1198P-201ENST00000516904 67 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 AL162424.1-201ENST00000602325 221 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 AC091152.3-201ENST00000604227 325 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 AC093831.2-201ENST00000624393 3427 ntBASIC2.91□□□□□ -1.94
SLC44A3Q8N4M1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
SLC44A3Q8N4M1 Y_RNA.82-201ENST00000363000 102 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.92-201ENST00000363043 102 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.122-201ENST00000363331 96 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.235-201ENST00000364412 102 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.306-201ENST00000365015 102 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.312-201ENST00000365089 102 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.322-201ENST00000365151 102 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-1175P-201ENST00000365200 107 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.464-201ENST00000384282 110 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.793-201ENST00000411222 111 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.626-201ENST00000411288 95 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 AC138623.1-201ENST00000418060 216 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 MTCO1P5-201ENST00000433573 344 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 RPL23AP3-201ENST00000453844 468 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.650-201ENST00000459002 102 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 RNA5SP54-201ENST00000516951 92 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.777-201ENST00000516982 102 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 AC233702.2-202ENST00000562547 291 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.771-201ENST00000598668 102 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 AC005520.5-201ENST00000613926 164 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 MIR6817-201ENST00000615588 66 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 AL590240.4-201ENST00000616908 390 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.789-201ENST00000622480 102 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 AC002543.1-201ENST00000299783 1954 ntBASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.9□□□□□ -1.95
SLC44A3Q8N4M1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 SNORA67.4-201ENST00000384688 142 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-21P-201ENST00000384710 107 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 SNORA46-201ENST00000384762 135 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 RNA5SP21-201ENST00000410917 96 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 RPL19P1-201ENST00000411635 428 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 AL390729.2-201ENST00000416137 156 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 AC244505.4-201ENST00000434905 287 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 SSXP5-201ENST00000443473 287 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 AL392103.1-201ENST00000447000 198 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 UQCRHP3-201ENST00000451503 251 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 SNORD2.1-201ENST00000458762 69 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 AC090525.1-201ENST00000479116 478 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 AC091959.1-201ENST00000495857 238 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 AC107393.1-201ENST00000512403 346 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.683-201ENST00000516508 93 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-255P-201ENST00000516957 105 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 SNORD19.2-201ENST00000516978 73 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 AC004832.5-201ENST00000608677 401 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 AC002076.2-201ENST00000617362 122 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 MIR6076-201ENST00000617521 113 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 BX322639.1-202ENST00000423987 2213 ntBASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.89□□□□□ -1.95
SLC44A3Q8N4M1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 MIR410-201ENST00000362222 80 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-545P-201ENST00000362681 104 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 Y_RNA.292-201ENST00000364904 97 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 SNORA51.4-201ENST00000364993 124 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 RNU6-746P-201ENST00000384112 109 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 BMS1P22-201ENST00000414726 313 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 AC019205.3-201ENST00000424573 156 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 RPS15AP5-201ENST00000436276 388 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 MRPS10P1-201ENST00000448483 130 ntBASIC2.88□□□□□ -1.95
SLC44A3Q8N4M1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms