Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.19□□□□□ -2.06
BEST3Q8N1M1 AC004386.2-201ENST00000441858 148 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 MTCO3P8-201ENST00000453691 755 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.19□□□□□ -2.06
BEST3Q8N1M1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.19□□□□□ -2.06
BEST3Q8N1M1 RNU1-41P-201ENST00000516161 162 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 RNU1-48P-201ENST00000516400 162 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 SNORA25.14-201ENST00000516481 132 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 RNU6-911P-201ENST00000516523 104 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
BEST3Q8N1M1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.19□□□□□ -2.06
BEST3Q8N1M1 UBL5P4-201ENST00000562584 236 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 MIR5006-201ENST00000583027 110 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 AC092447.9-201ENST00000603395 144 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 MIR1302-2-201ENST00000607096 138 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.19□□□□□ -2.06
BEST3Q8N1M1 AC005296.1-201ENST00000616145 209 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 AL132822.1-201ENST00000617063 513 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 MIR1248-201ENST00000629190 106 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 AC016717.2-201ENST00000609089 5141 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
BEST3Q8N1M1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
BEST3Q8N1M1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
BEST3Q8N1M1 Y_RNA.39-201ENST00000362620 98 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 RNU6-873P-201ENST00000363833 107 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 RNU4-42P-201ENST00000364738 142 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 RNU6-1227P-201ENST00000383981 107 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 MIR549A-201ENST00000385268 96 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 RNA5SP213-201ENST00000391031 106 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 RNA5SP425-201ENST00000410336 112 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 AL135786.1-201ENST00000415892 214 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.18□□□□□ -2.06
BEST3Q8N1M1 EIF1P2-201ENST00000428233 350 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 SUMO1P4-201ENST00000429430 302 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 AC005534.2-201ENST00000431047 433 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 AC096638.1-201ENST00000444678 216 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 AC009237.7-201ENST00000447357 229 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.18□□□□□ -2.06
BEST3Q8N1M1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.18□□□□□ -2.06
BEST3Q8N1M1 RNU6-1098P-201ENST00000516772 96 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 RNU6-667P-201ENST00000517186 102 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 AC034114.1-201ENST00000520293 285 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 DEFB131C-201ENST00000528817 165 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.18□□□□□ -2.06
BEST3Q8N1M1 MIR5695-201ENST00000579717 85 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 MIR4658-201ENST00000584344 65 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 SNRPGP17-201ENST00000603780 214 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.18□□□□□ -2.06
BEST3Q8N1M1 AL138825.1-201ENST00000618587 192 ntBASIC2.18□□□□□ -2.06
BEST3Q8N1M1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.18□□□□□ -2.06
BEST3Q8N1M1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
BEST3Q8N1M1 RNU1-62P-201ENST00000362599 164 ntBASIC2.17□□□□□ -2.06
BEST3Q8N1M1 RNU1-91P-201ENST00000364746 163 ntBASIC2.17□□□□□ -2.06
BEST3Q8N1M1 RNU6-281P-201ENST00000384212 103 ntBASIC2.17□□□□□ -2.06
BEST3Q8N1M1 SNORA80E-201ENST00000384744 137 ntBASIC2.17□□□□□ -2.06
BEST3Q8N1M1 AL357139.1-201ENST00000407792 426 ntBASIC2.17□□□□□ -2.06
BEST3Q8N1M1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.17□□□□□ -2.06
BEST3Q8N1M1 AC007064.1-201ENST00000412238 351 ntBASIC2.17□□□□□ -2.06
BEST3Q8N1M1 RNU7-14P-201ENST00000459331 62 ntBASIC2.17□□□□□ -2.06
BEST3Q8N1M1 RNU7-169P-201ENST00000459456 61 ntBASIC2.17□□□□□ -2.06
BEST3Q8N1M1 AC022868.1-201ENST00000517767 391 ntBASIC2.17□□□□□ -2.06
BEST3Q8N1M1 CYCSP26-201ENST00000534107 320 ntBASIC2.17□□□□□ -2.06
BEST3Q8N1M1 PRELID2P1-201ENST00000552837 301 ntBASIC2.17□□□□□ -2.06
BEST3Q8N1M1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.17□□□□□ -2.06
BEST3Q8N1M1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.17□□□□□ -2.06
BEST3Q8N1M1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.17□□□□□ -2.06
BEST3Q8N1M1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.17□□□□□ -2.06
BEST3Q8N1M1 AC006157.1-201ENST00000611750 366 ntBASIC2.17□□□□□ -2.06
BEST3Q8N1M1 AC138305.3-201ENST00000624988 240 ntBASIC2.17□□□□□ -2.06
BEST3Q8N1M1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
BEST3Q8N1M1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
BEST3Q8N1M1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
BEST3Q8N1M1 Y_RNA.28-201ENST00000362554 111 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 Y_RNA.31-201ENST00000362574 102 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 RNY1P14-201ENST00000384426 108 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 RNU6-1011P-201ENST00000384668 107 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 PMCHL1-202ENST00000423102 261 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 AL445305.1-201ENST00000432577 575 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.16□□□□□ -2.06
BEST3Q8N1M1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.16□□□□□ -2.06
BEST3Q8N1M1 RNU6-344P-201ENST00000516635 111 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 RNU6-1153P-201ENST00000516760 105 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 RN7SKP295-201ENST00000517264 153 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 RNU6-988P-201ENST00000519081 107 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 ANP32BP3-201ENST00000559213 706 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 MIR4719-201ENST00000585233 84 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 VN1R91P-201ENST00000594377 169 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 AC010999.1-201ENST00000611856 324 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 U2.1-201ENST00000618978 145 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 MIR4272-201ENST00000635924 64 ntBASIC2.16□□□□□ -2.06
BEST3Q8N1M1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
BEST3Q8N1M1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
BEST3Q8N1M1 Y_RNA.179-201ENST00000363844 90 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 RNU6-743P-201ENST00000364151 106 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 RNY3P11-201ENST00000364153 102 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 RNU6-793P-201ENST00000384233 104 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 RNU6-1026P-201ENST00000384465 108 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 MIR628-201ENST00000385229 95 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms