Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RPL39P34-201ENST00000477141 156 ntBASIC3.98□□□□□ -1.77
CCDC116Q8IYX3 RPS27P22-201ENST00000478056 241 ntBASIC3.98□□□□□ -1.77
CCDC116Q8IYX3 AC025647.1-201ENST00000517879 253 ntBASIC3.98□□□□□ -1.77
CCDC116Q8IYX3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC116Q8IYX3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCDC116Q8IYX3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC116Q8IYX3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC116Q8IYX3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC116Q8IYX3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 RNU1-32P-201ENST00000363937 159 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 RNA5SP509-201ENST00000364577 119 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 RNU6-1014P-201ENST00000383940 103 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 SNORA1-201ENST00000384107 130 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 AL590004.2-201ENST00000404787 371 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 EIF4EP4-201ENST00000424916 578 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 AC063976.3-201ENST00000426849 329 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 HMGN2P16-201ENST00000456802 261 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 RN7SL303P-201ENST00000469773 251 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 COX6CP6-201ENST00000490840 228 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 RN7SL691P-201ENST00000494487 301 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 RNA5SP281-201ENST00000516504 135 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 TVP23BP1-201ENST00000557500 617 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 MIR5096-201ENST00000583713 70 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 MIR432-201ENST00000606207 94 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 uc_338.14-201ENST00000613162 166 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 AC002076.2-201ENST00000617362 122 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 AL035470.1-201ENST00000622571 220 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 AC011944.2-201ENST00000624440 683 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 AC090517.3-201ENST00000625170 141 ntBASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC116Q8IYX3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC116Q8IYX3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 MIR1294-201ENST00000408503 142 ntBASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 RN7SKP27-201ENST00000410684 333 ntBASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 AC007064.1-201ENST00000412238 351 ntBASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 RPL30P4-201ENST00000429309 333 ntBASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 RN7SKP43-201ENST00000516173 320 ntBASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 RNU6-970P-201ENST00000516312 107 ntBASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 RNU6-113P-201ENST00000516653 101 ntBASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 AC011604.1-201ENST00000545978 196 ntBASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 MIR4284-201ENST00000578924 81 ntBASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 AC114781.5-201ENST00000615297 108 ntBASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 AC091152.2-201ENST00000591628 2569 ntBASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC116Q8IYX3 AC016588.2-201ENST00000632484 3021 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 Y_RNA.49-201ENST00000362714 112 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 RNU6-234P-201ENST00000365229 104 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 RNU6-1113P-201ENST00000384348 107 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 Y_RNA.544-201ENST00000384650 113 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 RNU6-440P-201ENST00000390882 105 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 AP000567.1-201ENST00000406413 156 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 MIR1179-201ENST00000408703 91 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 AC018634.1-201ENST00000437554 401 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 PPIAP15-201ENST00000479662 484 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 PARP4P3-201ENST00000510265 317 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 RNU6-948P-201ENST00000516374 107 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 RNU6-504P-201ENST00000516568 104 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 AC109329.2-201ENST00000519658 482 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 MIR3117-201ENST00000584034 78 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 AC062037.1-201ENST00000605302 128 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 JPX_2.1-201ENST00000614161 69 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 MIR8058-201ENST00000615737 89 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 AL137067.1-201ENST00000615933 120 ntBASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC116Q8IYX3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms