Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 RNU6-727P-201ENST00000363592 107 ntBASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 RNU6-487P-201ENST00000365430 104 ntBASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 RNU6-622P-201ENST00000384272 103 ntBASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 MIR626-201ENST00000385032 94 ntBASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 MIR549A-201ENST00000385268 96 ntBASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 RNU4-47P-201ENST00000410876 114 ntBASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 RPL23AP58-201ENST00000440453 469 ntBASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 AC090525.1-201ENST00000479116 478 ntBASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 RPS27P26-201ENST00000494583 239 ntBASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 RNU6-581P-201ENST00000516214 105 ntBASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 AC002076.2-201ENST00000617362 122 ntBASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 MIR6076-201ENST00000617521 113 ntBASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 AC073308.1-201ENST00000623696 305 ntBASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 AC008873.1-201ENST00000625051 138 ntBASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.33□□□□□ -1.88
TMEFF1Q8IYR6 MFSD8-233ENST00000641482 4860 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 Y_RNA.337-201ENST00000365312 102 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 RNU6-1264P-201ENST00000383891 107 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 SNORA20-201ENST00000384662 132 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 SNORA8.3-201ENST00000384679 139 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 AC025750.2-201ENST00000442609 450 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 HMGN2P10-201ENST00000448085 265 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 RPS29P20-201ENST00000489592 171 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 SNORA70.14-201ENST00000516205 110 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 Y_RNA.686-201ENST00000516548 134 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 RNU6-1234P-201ENST00000516877 103 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 MIR3136-201ENST00000583498 78 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 AC020914.4-201ENST00000597690 277 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 AC005520.5-201ENST00000613926 164 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 TUG1_4.1-201ENST00000619464 181 ntBASIC3.32□□□□□ -1.88
TMEFF1Q8IYR6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 AC010329.5-201ENST00000623497 2174 ntBASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 RNU6-199P-201ENST00000362954 107 ntBASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 snoU2_19.4-201ENST00000364329 80 ntBASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 RNU6-80P-201ENST00000384195 107 ntBASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 SNORA26.5-201ENST00000391215 123 ntBASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 MIR208B-201ENST00000401172 77 ntBASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 AP000567.1-201ENST00000406413 156 ntBASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 SNRPGP3-201ENST00000469405 227 ntBASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 RPL30P14-201ENST00000482744 348 ntBASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 MIR3658-201ENST00000636291 56 ntBASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 AF127577.6-201ENST00000623352 2191 ntBASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TMEFF1Q8IYR6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 Y_RNA.172-201ENST00000363765 102 ntBASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 RNU6-454P-201ENST00000364292 107 ntBASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 Y_RNA.287-201ENST00000364853 94 ntBASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 Y_RNA.420-201ENST00000384043 110 ntBASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 Y_RNA.542-201ENST00000384641 111 ntBASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 RNU6-710P-201ENST00000410424 105 ntBASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 AC010154.1-201ENST00000425857 269 ntBASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 AC109810.1-201ENST00000534066 224 ntBASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 AC026333.2-201ENST00000542164 106 ntBASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 MIR3162-201ENST00000581818 82 ntBASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 AC110741.2-201ENST00000605278 268 ntBASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 AL137790.1-201ENST00000634283 177 ntBASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 SNORD98-201ENST00000636377 67 ntBASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 AC068647.1-201ENST00000489539 2265 ntBASIC3.3□□□□□ -1.88
TMEFF1Q8IYR6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.29□□□□□ -1.88
TMEFF1Q8IYR6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TMEFF1Q8IYR6 AC002543.1-201ENST00000299783 1954 ntBASIC3.29□□□□□ -1.88
TMEFF1Q8IYR6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.29□□□□□ -1.88
TMEFF1Q8IYR6 AC080128.1-201ENST00000474389 1917 ntBASIC3.29□□□□□ -1.88
TMEFF1Q8IYR6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TMEFF1Q8IYR6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEFF1Q8IYR6 Y_RNA.293-201ENST00000364908 93 ntBASIC3.29□□□□□ -1.88
TMEFF1Q8IYR6 EI24P2-201ENST00000397776 1076 ntBASIC3.29□□□□□ -1.88
TMEFF1Q8IYR6 AL355497.1-201ENST00000406262 551 ntBASIC3.29□□□□□ -1.88
TMEFF1Q8IYR6 RNU2-52P-201ENST00000410680 190 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms