Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-545P-201ENST00000362681 104 ntBASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 Y_RNA.160-201ENST00000363677 92 ntBASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 RNU6-1059P-201ENST00000363752 98 ntBASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 RNU6-596P-201ENST00000365395 98 ntBASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 RNU6-767P-201ENST00000384132 107 ntBASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 U8.10-201ENST00000384260 133 ntBASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 MIR487A-201ENST00000385009 80 ntBASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 RNU6-876P-201ENST00000391295 104 ntBASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 AL353689.1-201ENST00000438895 199 ntBASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 MTCO3P8-201ENST00000453691 755 ntBASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 RPL23AP3-201ENST00000453844 468 ntBASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 AC015712.3-201ENST00000559380 164 ntBASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 MIR3169-201ENST00000578032 83 ntBASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 SNRPGP20-201ENST00000604477 205 ntBASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 RMST_6.1-201ENST00000611980 203 ntBASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.56□□□□□ -2.16
C9orf40Q8IXQ3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 ZNF204P-201ENST00000416749 2397 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 MIR340-201ENST00000362125 95 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 SNORD115-32-201ENST00000364079 82 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 RNA5SP190-201ENST00000365222 118 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 Y_RNA.533-201ENST00000384596 114 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 MIR548K-201ENST00000408406 116 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 MIR548F5-201ENST00000408421 86 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 MIR320B2-201ENST00000408479 138 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 RNU6-174P-201ENST00000410406 106 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 AC074085.1-201ENST00000413598 418 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 AL158823.1-201ENST00000418441 478 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 RPL31P63-201ENST00000422565 375 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 RPS3AP52-201ENST00000435639 297 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 AC007395.1-201ENST00000451333 677 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 PMCHL2-203ENST00000457791 237 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 SNORD5.1-201ENST00000458800 75 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 RNU1-131P-201ENST00000458943 161 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 snoU13.30-201ENST00000458951 104 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 AC046134.1-201ENST00000514454 666 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 AC024614.2-201ENST00000577584 372 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 7SK.7-201ENST00000603504 247 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 MIR502-201ENST00000606349 86 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 SDR42E1P4-201ENST00000620894 481 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 BX322639.1-202ENST00000423987 2213 ntBASIC1.55□□□□□ -2.16
C9orf40Q8IXQ3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 MIR153-2-201ENST00000385225 87 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 MT-TL1-201ENST00000386347 75 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 MIR300-201ENST00000401138 83 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 RNA5SP501-201ENST00000410990 112 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 AC004866.1-201ENST00000411748 78 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 RPS20P15-201ENST00000412792 311 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 AC243428.1-201ENST00000421099 264 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 AC009237.7-201ENST00000447357 229 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 AC107399.1-201ENST00000451226 265 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 SNORD13-201ENST00000459299 104 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 RPL31P58-201ENST00000469001 379 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 RNU7-30P-201ENST00000516835 62 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 RNA5SP54-201ENST00000516951 92 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 CBX3P4-201ENST00000538909 354 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 AC005668.1-201ENST00000571142 476 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 MIR4524B-201ENST00000581569 115 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 AC243960.4-201ENST00000600532 288 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 AC018462.2-201ENST00000605375 395 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 U1.36-201ENST00000620684 176 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 AL359697.1-201ENST00000624879 587 ntBASIC1.54□□□□□ -2.16
C9orf40Q8IXQ3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 Y_RNA.279-201ENST00000364763 95 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 Y_RNA.319-201ENST00000365138 92 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 RNU6-842P-201ENST00000384269 107 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 ZNF299P-201ENST00000406845 1804 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 MIR1283-1-201ENST00000408494 87 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 MTCO1P44-201ENST00000441935 243 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 RNA5SP233-201ENST00000459153 113 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 AC010531.2-201ENST00000465012 153 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 RPL30P10-201ENST00000488148 337 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 RNU6-1016P-201ENST00000516689 94 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 RNU6-1198P-201ENST00000516904 67 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 RRN3P3-201ENST00000549207 578 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 271.7 ms