Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC022616.8-201ENST00000533569 253 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.05□□□□□ -2.08
NPHP3Q7Z494 Z98751.3-201ENST00000604447 521 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 MIR6128-201ENST00000615528 109 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 MIR6734-201ENST00000621166 68 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 CENPCP1-201ENST00000533085 2578 ntBASIC2.05□□□□□ -2.08
NPHP3Q7Z494 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
NPHP3Q7Z494 RNU6-845P-201ENST00000362578 103 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 Y_RNA.184-201ENST00000363884 108 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NPHP3Q7Z494 RNU2-48P-201ENST00000410694 191 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 RNA5SP450-201ENST00000411206 102 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 AL356379.1-201ENST00000414105 126 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 AC138393.2-201ENST00000414742 246 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 RPL21P111-201ENST00000418453 477 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 AC096920.1-201ENST00000423991 241 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.04□□□□□ -2.08
NPHP3Q7Z494 AL353572.1-201ENST00000442490 417 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 MTND1P17-201ENST00000448961 204 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 snoU13.6-201ENST00000458785 104 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 AC114801.2-201ENST00000503825 781 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 AC021146.2-201ENST00000504736 556 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 AL117351.2-201ENST00000513571 157 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 MIR449C-201ENST00000516047 92 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 AL162373.1-201ENST00000620433 407 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 SDR42E1P4-201ENST00000620894 481 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 AC091895.1-201ENST00000624494 256 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 AC099654.14-201ENST00000638599 341 ntBASIC2.04□□□□□ -2.08
NPHP3Q7Z494 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NPHP3Q7Z494 SNORD50.1-201ENST00000362987 71 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 RNU6-1059P-201ENST00000363752 98 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 RNU6-743P-201ENST00000364151 106 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.03□□□□□ -2.08
NPHP3Q7Z494 SNORA29-201ENST00000384183 140 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 RNU6-611P-201ENST00000384276 104 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 RNU6-378P-201ENST00000384324 107 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 Y_RNA.473-201ENST00000384333 102 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 SNORA46.1-201ENST00000391069 153 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 MIR548F5-201ENST00000408421 86 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 PDCL2P1-201ENST00000419302 352 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 AL590556.1-201ENST00000423231 483 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 AL354695.1-201ENST00000427935 228 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 RPS4XP11-201ENST00000446897 772 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.03□□□□□ -2.08
NPHP3Q7Z494 PRELID3BP1-201ENST00000457142 540 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.03□□□□□ -2.08
NPHP3Q7Z494 MTND5P5-201ENST00000503764 376 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 AC005741.1-201ENST00000511094 432 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.03□□□□□ -2.08
NPHP3Q7Z494 AC021231.3-201ENST00000558497 370 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 MIR3122-201ENST00000577243 73 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 MIR3923-201ENST00000579521 83 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 MIR4801-201ENST00000582704 82 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 POLR3GP2-201ENST00000588366 668 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 RBM11P1-201ENST00000604951 799 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 AC124303.1-201ENST00000605703 360 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 MIR6078-201ENST00000611069 100 ntBASIC2.03□□□□□ -2.08
NPHP3Q7Z494 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NPHP3Q7Z494 AL359851.1-201ENST00000569460 4997 ntBASIC2.02□□□□□ -2.09
NPHP3Q7Z494 AL512604.1-201ENST00000404812 257 ntBASIC2.02□□□□□ -2.09
NPHP3Q7Z494 AC012306.1-201ENST00000423267 114 ntBASIC2.02□□□□□ -2.09
NPHP3Q7Z494 FO393415.2-201ENST00000480085 343 ntBASIC2.02□□□□□ -2.09
NPHP3Q7Z494 HMGN1P12-201ENST00000499125 195 ntBASIC2.02□□□□□ -2.09
NPHP3Q7Z494 AC103851.1-201ENST00000506833 274 ntBASIC2.02□□□□□ -2.09
NPHP3Q7Z494 AC046134.1-201ENST00000514454 666 ntBASIC2.02□□□□□ -2.09
NPHP3Q7Z494 SNORA20.3-201ENST00000516880 132 ntBASIC2.02□□□□□ -2.09
NPHP3Q7Z494 AL132822.1-201ENST00000617063 513 ntBASIC2.02□□□□□ -2.09
NPHP3Q7Z494 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.02□□□□□ -2.09
NPHP3Q7Z494 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.02□□□□□ -2.09
NPHP3Q7Z494 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NPHP3Q7Z494 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NPHP3Q7Z494 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
NPHP3Q7Z494 MIR96-201ENST00000362288 78 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 Y_RNA.303-201ENST00000364998 94 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 RNU6-968P-201ENST00000384076 107 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 RNU6-784P-201ENST00000384330 106 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 MTCYBP2-201ENST00000407745 171 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 MIR1262-201ENST00000408276 93 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 MIR548K-201ENST00000408406 116 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 RNA5SP201-201ENST00000410316 124 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.01□□□□□ -2.09
NPHP3Q7Z494 USP9YP30-201ENST00000430729 455 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.01□□□□□ -2.09
NPHP3Q7Z494 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.01□□□□□ -2.09
NPHP3Q7Z494 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
NPHP3Q7Z494 AC018630.3-201ENST00000542637 96 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 AC011604.1-201ENST00000545978 196 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 AC109446.1-201ENST00000566172 220 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 CYP4A27P-201ENST00000567218 190 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.01□□□□□ -2.09
NPHP3Q7Z494 FGF7P1-201ENST00000582820 288 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 PCGEM1.1-201ENST00000613431 131 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 AC022709.1-201ENST00000615967 87 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 AC022306.2-201ENST00000617563 647 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 MIR1248-201ENST00000629190 106 ntBASIC2.01□□□□□ -2.09
NPHP3Q7Z494 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms