Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 Y_RNA.31-201ENST00000362574 102 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 SNORA63-201ENST00000363450 132 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 SNORD115-32-201ENST00000364079 82 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 RNU6-1032P-201ENST00000384100 107 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 MIR499A-201ENST00000384903 122 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 MIR627-201ENST00000384979 97 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 OR2AQ1P-201ENST00000451972 200 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 AC090515.1-201ENST00000465295 476 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 RNU6-988P-201ENST00000519081 107 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 AL442663.2-201ENST00000554385 511 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 MIR3616-201ENST00000584070 92 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 MIR3171-201ENST00000584270 74 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 AC022432.1-201ENST00000595739 310 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 AL138963.2-201ENST00000605137 226 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 AC006157.1-201ENST00000611750 366 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 MIR5739-201ENST00000619803 80 ntBASIC2.81□□□□□ -1.96
KRT28Q7Z3Y7 Z82195.2-201ENST00000612348 18351 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 RNU4-15P-201ENST00000362613 141 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 Y_RNA.132-201ENST00000363421 102 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 RNU1-115P-201ENST00000365329 160 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 SET-203ENST00000372688 801 ntTSL 2 BASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 MIR29B2-201ENST00000385055 81 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 RPS26P42-201ENST00000413485 326 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 AC011753.1-201ENST00000451001 220 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 AP000705.1-201ENST00000454567 350 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 RNU7-169P-201ENST00000459456 61 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 AC080013.2-201ENST00000460866 323 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 RNU6-1198P-201ENST00000516904 67 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 RNU6-586P-201ENST00000517265 104 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 AC023442.1-201ENST00000531247 422 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 AC004486.1-201ENST00000546846 233 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 MIR3670-2-201ENST00000582974 65 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 MIR3670-1-201ENST00000584160 65 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 MIR3670-3-201ENST00000584855 65 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 AC092447.9-201ENST00000603395 144 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 AL356280.1-201ENST00000603614 379 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 MIR3670-4-201ENST00000612260 65 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
KRT28Q7Z3Y7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRT28Q7Z3Y7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
KRT28Q7Z3Y7 MIR337-201ENST00000362281 93 ntBASIC2.79□□□□□ -1.96
KRT28Q7Z3Y7 RNU1-72P-201ENST00000362976 153 ntBASIC2.79□□□□□ -1.96
KRT28Q7Z3Y7 Y_RNA.106-201ENST00000363189 100 ntBASIC2.79□□□□□ -1.96
KRT28Q7Z3Y7 RNU6-17P-201ENST00000384245 107 ntBASIC2.79□□□□□ -1.96
KRT28Q7Z3Y7 RNU6-378P-201ENST00000384324 107 ntBASIC2.79□□□□□ -1.96
KRT28Q7Z3Y7 RNU6-18P-201ENST00000384527 107 ntBASIC2.79□□□□□ -1.96
KRT28Q7Z3Y7 AL163540.1-201ENST00000485382 386 ntBASIC2.79□□□□□ -1.96
KRT28Q7Z3Y7 RN7SKP295-201ENST00000517264 153 ntBASIC2.79□□□□□ -1.96
KRT28Q7Z3Y7 AC005520.5-201ENST00000613926 164 ntBASIC2.79□□□□□ -1.96
KRT28Q7Z3Y7 AC083806.3-201ENST00000614016 455 ntBASIC2.79□□□□□ -1.96
KRT28Q7Z3Y7 AC008121.3-201ENST00000618726 433 ntBASIC2.79□□□□□ -1.96
KRT28Q7Z3Y7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 Y_RNA.28-201ENST00000362554 111 ntBASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 Y_RNA.39-201ENST00000362620 98 ntBASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 Y_RNA.122-201ENST00000363331 96 ntBASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 U3.9-201ENST00000363823 204 ntBASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 Y_RNA.202-201ENST00000364083 110 ntBASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 RNY3P11-201ENST00000364153 102 ntBASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 Y_RNA.319-201ENST00000365138 92 ntBASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 SNORA69.1-201ENST00000390904 137 ntBASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 AL445687.1-201ENST00000439946 251 ntBASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 AC091144.1-201ENST00000519573 138 ntBASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 AL713866.2-201ENST00000603579 219 ntBASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 snoU13.31-201ENST00000607291 104 ntBASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 PCGEM1.1-201ENST00000613431 131 ntBASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 AC138305.3-201ENST00000624988 240 ntBASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.78□□□□□ -1.96
KRT28Q7Z3Y7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 RNU6-874P-201ENST00000362390 105 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 Y_RNA.358-201ENST00000365491 99 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 Y_RNA.364-201ENST00000365532 101 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 U8.10-201ENST00000384260 133 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 RNU6-220P-201ENST00000390919 107 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 SNORA46.1-201ENST00000391069 153 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 Y_RNA.597-201ENST00000410463 100 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 RNU2-63P-201ENST00000410792 194 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 RNU2-25P-201ENST00000411041 191 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 AC114482.1-201ENST00000418010 247 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 USP9YP16-201ENST00000430287 407 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 MTND4P19-201ENST00000446659 478 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 USP9YP23-201ENST00000455085 407 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 CYP2C59P-201ENST00000457790 269 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms