Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC092325.1-201ENST00000566449 554 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 AC131055.1-201ENST00000584626 316 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 RNU6-94P-201ENST00000607728 107 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 AC010975.3-201ENST00000618727 978 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 AP000568.1-201ENST00000282964 442 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 SNORA18.1-201ENST00000363418 128 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 SNORD114-12-201ENST00000365400 75 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 MIR217-201ENST00000384817 110 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 AC027644.1-201ENST00000419595 298 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 MTND1P20-201ENST00000430341 950 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 MTND1P31-201ENST00000449206 961 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 AC114811.1-201ENST00000507207 168 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 RNU6-977P-201ENST00000516411 103 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 AC090517.1-201ENST00000569307 266 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 MIR3923-201ENST00000579521 83 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 AL390123.1-201ENST00000603216 237 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 MIR412-201ENST00000362142 91 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 SNORD56.1-201ENST00000362913 68 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 RNA5SP517-201ENST00000364724 117 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 RNU7-165P-201ENST00000458864 60 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 U8.21-201ENST00000459536 136 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 SCARNA17-201ENST00000516183 144 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 OR8K2P-201ENST00000524645 927 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 AC025678.1-201ENST00000567861 338 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 AL138889.2-201ENST00000603883 242 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 AC138749.5-201ENST00000611461 208 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 AL357080.1-201ENST00000617394 239 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 AC253576.2-201ENST00000618815 580 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 SNORD65C-201ENST00000390962 71 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 SNORA26.3-201ENST00000391119 136 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 MIR892B-201ENST00000401279 77 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 MTCYBP2-201ENST00000407745 171 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 AL590632.1-201ENST00000424289 371 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 AC244670.1-201ENST00000436879 112 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 RNU7-56P-201ENST00000458744 62 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 MRPS36P4-201ENST00000534436 298 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 MIR5697-201ENST00000578045 78 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 MIR4293-201ENST00000584305 78 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 AC005176.2-201ENST00000596933 147 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 Z99497.2-201ENST00000603634 310 ntBASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.3□□□□□ -2.46
CSPG4Q6UVK1 SNORD41-201ENST00000386967 70 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 RNU6-932P-201ENST00000391108 106 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 RPL17P35-201ENST00000432217 549 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 MTND2P20-201ENST00000440805 661 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 RNA5SP268-201ENST00000516828 124 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 AC105185.1-201ENST00000518705 535 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 AP003716.2-201ENST00000528260 108 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 NAMPTP3-201ENST00000569273 224 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 MIR4441-201ENST00000582623 100 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 AL117336.2-201ENST00000602435 335 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 AL136317.1-201ENST00000612653 226 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 AC122133.1-201ENST00000613964 233 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 RNA5SP109-201ENST00000391010 116 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 RNU6-293P-201ENST00000411259 106 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 CDK8P2-201ENST00000415020 547 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 NFU1P2-201ENST00000448700 469 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 PCNPP5-201ENST00000452246 481 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 OR9P1P-201ENST00000496431 281 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 AC010486.2-201ENST00000505572 483 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 RBBP4P6-201ENST00000508098 202 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 AC010525.2-201ENST00000590920 195 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 AL606834.3-201ENST00000602615 496 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 AC069545.1-201ENST00000605671 358 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms