Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 RNA5SP356-201ENST00000515972 94 ntBASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 RNA5SP54-201ENST00000516951 92 ntBASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 MIR3186-201ENST00000577404 85 ntBASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 MIR548X2-201ENST00000579776 100 ntBASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 SRP72P2-201ENST00000344851 1979 ntBASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 Y_RNA.71-201ENST00000362892 104 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 Y_RNA.127-201ENST00000363386 109 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 SNORA14A-201ENST00000364773 135 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 RNU6-275P-201ENST00000364910 107 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 Y_RNA.498-201ENST00000384460 102 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 RNU1-89P-201ENST00000384592 164 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 SNORD15B-201ENST00000384714 146 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 SNORA40-201ENST00000388090 126 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 EEF1A1P41-201ENST00000414667 207 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 CR769767.1-201ENST00000436337 346 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 U8.19-201ENST00000459095 133 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 RNU7-23P-201ENST00000459465 62 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 AP002884.2-201ENST00000471647 395 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 AC100767.1-201ENST00000528178 123 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 TGIF1P1-201ENST00000558095 802 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CNKSR3Q6P9H4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 RNU6-799P-201ENST00000363567 107 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 Y_RNA.179-201ENST00000363844 90 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 SNORA40.19-201ENST00000390846 128 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 RNU6-381P-201ENST00000391259 108 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 RNU2-54P-201ENST00000410299 190 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 RHEBP3-201ENST00000411920 351 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 AL139281.1-201ENST00000422120 335 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 AL714022.1-201ENST00000439897 151 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 AC125238.1-201ENST00000448842 249 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 AL137159.1-201ENST00000452808 512 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 AC091179.3-201ENST00000474761 144 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 RPS29P20-201ENST00000489592 171 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 RNU6-1333P-201ENST00000516162 93 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 MIR3162-201ENST00000581818 82 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 AL359198.2-201ENST00000611836 194 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CNKSR3Q6P9H4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
CNKSR3Q6P9H4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.4□□□□□ -1.86
CNKSR3Q6P9H4 AC010680.1-201ENST00000590024 3590 ntBASIC3.4□□□□□ -1.86
CNKSR3Q6P9H4 RNU6-153P-201ENST00000364422 104 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 RNA5SP126-201ENST00000365092 109 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-763P-201ENST00000390865 106 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 SNORA26.3-201ENST00000391119 136 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 RPS26P42-201ENST00000413485 326 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 AC009963.1-201ENST00000417265 157 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 AC012306.1-201ENST00000423267 114 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 AC078809.1-201ENST00000427601 140 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 AC022018.1-201ENST00000430685 241 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 AL139132.1-201ENST00000431587 344 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 CST9LP2-201ENST00000437612 320 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 RPS27AP10-201ENST00000496103 208 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 AC091826.1-201ENST00000514065 313 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-919P-201ENST00000516731 104 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-1234P-201ENST00000516877 103 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 GTF3AP2-201ENST00000557014 266 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 AC021231.3-201ENST00000558497 370 ntBASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CNKSR3Q6P9H4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 MIR449A-201ENST00000362113 91 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 Y_RNA.329-201ENST00000365209 107 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 RNU4-11P-201ENST00000365287 132 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 SNORA20-201ENST00000384662 132 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 AL512633.1-201ENST00000399931 655 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 RN7SKP284-201ENST00000411002 343 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 AC244670.1-201ENST00000436879 112 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 AL135790.2-201ENST00000437701 267 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 SNORA25.12-201ENST00000516202 82 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 SNORA31.21-201ENST00000517180 77 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 CYCSP23-201ENST00000519781 313 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms