Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNU6-859P-201ENST00000362728 107 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 Y_RNA.65-201ENST00000362846 100 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 Y_RNA.76-201ENST00000362931 109 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 SNORA25.6-201ENST00000364121 118 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 RNU6-1062P-201ENST00000383908 107 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 RNU6-541P-201ENST00000384709 110 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 Y_RNA.570-201ENST00000384750 101 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 RNU4-30P-201ENST00000410245 143 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 MTND5P15-201ENST00000434246 349 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 AL161651.1-201ENST00000440882 223 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 SUMO1P2-201ENST00000452524 304 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 AC096725.1-201ENST00000514266 313 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 RNU4-71P-201ENST00000516258 113 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 SNORA81.3-201ENST00000517283 198 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 AK6P2-201ENST00000549020 471 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 AC021231.3-201ENST00000558497 370 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 MIR5092-201ENST00000583139 88 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 BX284668.6-201ENST00000606899 438 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 FTX_2.1-201ENST00000618816 94 ntBASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 AC092435.3-201ENST00000565538 3654 ntBASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 AC062016.1-201ENST00000355719 319 ntBASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 Y_RNA.54-201ENST00000362766 105 ntBASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 RNU4-90P-201ENST00000362773 141 ntBASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 RNU6-280P-201ENST00000364145 104 ntBASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 RNA5SP139-201ENST00000364340 117 ntBASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 RNU6-198P-201ENST00000384258 104 ntBASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 Y_RNA.555-201ENST00000384673 110 ntBASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 AC012306.1-201ENST00000423267 114 ntBASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 RNU5F-8P-201ENST00000515941 111 ntBASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ZNF549Q6P9A3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 Y_RNA.40-201ENST00000362645 93 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 RNU6-873P-201ENST00000363833 107 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 RNU6-20P-201ENST00000384106 107 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 Y_RNA.446-201ENST00000384178 104 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 CYCSP48-201ENST00000417124 323 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 PIGPP3-201ENST00000425307 415 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 RPS15AP5-201ENST00000436276 388 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 AC007215.1-201ENST00000464893 276 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 SNORA40.9-201ENST00000515895 93 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 RNA5SP356-201ENST00000515972 94 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 RNU6-966P-201ENST00000516479 104 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 SNORD19.2-201ENST00000516978 73 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 RN7SKP40-201ENST00000517211 242 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 AC055872.1-201ENST00000570978 278 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 MIR4319-201ENST00000577285 85 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 SNORD113-5-201ENST00000607261 78 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 AC004792.1-201ENST00000614523 137 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 MIR3199-2-201ENST00000636243 86 ntBASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
ZNF549Q6P9A3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 MIR6073-201ENST00000352083 89 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 RNU6-626P-201ENST00000363354 107 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 Y_RNA.297-201ENST00000364950 91 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 RNU6-326P-201ENST00000365480 107 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 MIR549A-201ENST00000385268 96 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 PCNPP3-201ENST00000393579 471 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 RNU6-651P-201ENST00000411040 105 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 MTND2P29-201ENST00000438595 412 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 RPS12P2-201ENST00000439728 269 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 AC010095.1-201ENST00000443543 144 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 PRELID3BP1-201ENST00000457142 540 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 SNORA59A-201ENST00000459326 152 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 SEPT14P8-201ENST00000508026 178 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 RNU5F-2P-201ENST00000516066 82 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 RNA5SP320-201ENST00000516263 124 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 RRN3P3-201ENST00000549207 578 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms