Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 RN7SKP220-201ENST00000410611 288 ntBASIC3.92□□□□□ -1.78
PRPF40BQ6NWY9 BTF3P11-201ENST00000426582 477 ntBASIC3.92□□□□□ -1.78
PRPF40BQ6NWY9 AC006539.3-201ENST00000454258 129 ntBASIC3.92□□□□□ -1.78
PRPF40BQ6NWY9 RPS29P26-201ENST00000477483 171 ntBASIC3.92□□□□□ -1.78
PRPF40BQ6NWY9 SNORA31.1-201ENST00000515993 133 ntBASIC3.92□□□□□ -1.78
PRPF40BQ6NWY9 SNORA31.5-201ENST00000516190 133 ntBASIC3.92□□□□□ -1.78
PRPF40BQ6NWY9 AC104027.1-201ENST00000521887 300 ntBASIC3.92□□□□□ -1.78
PRPF40BQ6NWY9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF40BQ6NWY9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.92□□□□□ -1.78
PRPF40BQ6NWY9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF40BQ6NWY9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 RNU6-529P-201ENST00000363383 104 ntBASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 SNORA71.1-201ENST00000364523 117 ntBASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 RNU6-1264P-201ENST00000383891 107 ntBASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 Y_RNA.415-201ENST00000384012 112 ntBASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 AC027124.2-201ENST00000428249 105 ntBASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 AL139132.1-201ENST00000431587 344 ntBASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 CST9LP2-201ENST00000437612 320 ntBASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 MIR3945-201ENST00000581853 98 ntBASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 SNORD11B-201ENST00000607707 90 ntBASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 AC104465.1-201ENST00000611365 139 ntBASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 AC005562.2-201ENST00000618264 111 ntBASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 snoU18.1-201ENST00000629629 71 ntBASIC3.91□□□□□ -1.78
PRPF40BQ6NWY9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.9□□□□□ -1.78
PRPF40BQ6NWY9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.9□□□□□ -1.78
PRPF40BQ6NWY9 Y_RNA.40-201ENST00000362645 93 ntBASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 U3.9-201ENST00000363823 204 ntBASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 Y_RNA.435-201ENST00000384095 112 ntBASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 EEF1A1P41-201ENST00000414667 207 ntBASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 AC009963.1-201ENST00000417265 157 ntBASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 OOSP1P1-201ENST00000423265 274 ntBASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 AC140059.1-201ENST00000489238 361 ntBASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 SNORA31.21-201ENST00000517180 77 ntBASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 MIR5047-201ENST00000579212 100 ntBASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 MIR4308-201ENST00000580634 81 ntBASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 PCGEM1.1-201ENST00000613431 131 ntBASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 uc_338.25-201ENST00000613756 156 ntBASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 AL365265.1-201ENST00000621045 234 ntBASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 MIR622-201ENST00000638396 96 ntBASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PRPF40BQ6NWY9 AC000403.1-201ENST00000613696 3585 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 RNU6-1272P-201ENST00000362776 107 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 RNU6-655P-201ENST00000362858 107 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 RNU6-804P-201ENST00000384286 107 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 RNU6-750P-201ENST00000390946 107 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 RNA5SP252-201ENST00000391131 119 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 AL357139.1-201ENST00000407792 426 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 snoU13.14-201ENST00000459372 104 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 RNU6-1219P-201ENST00000516143 112 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 RNU1-143P-201ENST00000516296 146 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 RNU1-117P-201ENST00000517041 158 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 MRPS18CP4-201ENST00000535821 231 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 EIF4A1P12-201ENST00000551910 141 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 AC025281.1-201ENST00000567026 265 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 MIR5006-201ENST00000583027 110 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 AC104984.5-201ENST00000586878 94 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 U1.23-201ENST00000610293 146 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 RNU1-68P-201ENST00000615382 146 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 MIR6715A-201ENST00000615929 79 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 U1.39-201ENST00000621562 146 ntBASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF40BQ6NWY9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
PRPF40BQ6NWY9 RNU6-1210P-201ENST00000363775 107 ntBASIC3.88□□□□□ -1.79
PRPF40BQ6NWY9 RNA5SP201-201ENST00000410316 124 ntBASIC3.88□□□□□ -1.79
PRPF40BQ6NWY9 RNU6-1199P-201ENST00000411249 104 ntBASIC3.88□□□□□ -1.79
PRPF40BQ6NWY9 AC004386.2-201ENST00000441858 148 ntBASIC3.88□□□□□ -1.79
PRPF40BQ6NWY9 RPL31P41-201ENST00000477967 372 ntBASIC3.88□□□□□ -1.79
PRPF40BQ6NWY9 AC145146.1-201ENST00000496370 254 ntBASIC3.88□□□□□ -1.79
PRPF40BQ6NWY9 AP002001.1-203ENST00000534002 267 ntBASIC3.88□□□□□ -1.79
PRPF40BQ6NWY9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.88□□□□□ -1.79
PRPF40BQ6NWY9 AC009127.3-201ENST00000570531 403 ntBASIC3.88□□□□□ -1.79
PRPF40BQ6NWY9 MIR5692C2-201ENST00000577959 77 ntBASIC3.88□□□□□ -1.79
PRPF40BQ6NWY9 TCL6_2.1-201ENST00000615162 119 ntBASIC3.88□□□□□ -1.79
PRPF40BQ6NWY9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.88□□□□□ -1.79
PRPF40BQ6NWY9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF40BQ6NWY9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 Y_RNA.329-201ENST00000365209 107 ntBASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 RNA5SP240-201ENST00000365355 128 ntBASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 RNY1P5-201ENST00000383890 115 ntBASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 MIR186-201ENST00000384988 86 ntBASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 AL606753.1-201ENST00000427435 87 ntBASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 AL135938.1-201ENST00000443141 297 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms