Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 Y_RNA.269-201ENST00000364685 89 ntBASIC1.45□□□□□ -2.18
ATL3Q6DD88 Y_RNA.373-201ENST00000365600 103 ntBASIC1.45□□□□□ -2.18
ATL3Q6DD88 AL117342.1-201ENST00000404861 406 ntBASIC1.45□□□□□ -2.18
ATL3Q6DD88 AC004866.1-201ENST00000411748 78 ntBASIC1.45□□□□□ -2.18
ATL3Q6DD88 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.45□□□□□ -2.18
ATL3Q6DD88 MTCO1P21-201ENST00000416634 589 ntBASIC1.45□□□□□ -2.18
ATL3Q6DD88 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
ATL3Q6DD88 AL163540.1-201ENST00000485382 386 ntBASIC1.45□□□□□ -2.18
ATL3Q6DD88 RPL23AP75-201ENST00000491601 451 ntBASIC1.45□□□□□ -2.18
ATL3Q6DD88 HMGN1P13-201ENST00000505795 138 ntBASIC1.45□□□□□ -2.18
ATL3Q6DD88 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.45□□□□□ -2.18
ATL3Q6DD88 AC067942.3-201ENST00000512025 362 ntBASIC1.45□□□□□ -2.18
ATL3Q6DD88 SNORA31.17-201ENST00000516953 127 ntBASIC1.45□□□□□ -2.18
ATL3Q6DD88 SUMO2P18-201ENST00000518873 252 ntBASIC1.45□□□□□ -2.18
ATL3Q6DD88 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.45□□□□□ -2.18
ATL3Q6DD88 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
ATL3Q6DD88 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.45□□□□□ -2.18
ATL3Q6DD88 AC245505.1-201ENST00000556398 224 ntBASIC1.45□□□□□ -2.18
ATL3Q6DD88 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.45□□□□□ -2.18
ATL3Q6DD88 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.44□□□□□ -2.18
ATL3Q6DD88 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
ATL3Q6DD88 Y_RNA.67-201ENST00000362870 100 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 SNORD50.1-201ENST00000362987 71 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 RNU6-414P-201ENST00000363705 104 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 RNU6-128P-201ENST00000383976 107 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 SNORA40.6-201ENST00000391153 128 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 RNU6-332P-201ENST00000391193 108 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 AL590002.1-201ENST00000406554 418 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 Y_RNA.595-201ENST00000410403 105 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 RNA5SP494-201ENST00000410653 129 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
ATL3Q6DD88 C8orf59P1-201ENST00000429930 303 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 UBE2V1P8-201ENST00000437166 265 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 OR2AQ1P-201ENST00000451972 200 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.44□□□□□ -2.18
ATL3Q6DD88 RNU7-187P-201ENST00000458985 68 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 AC004223.1-201ENST00000479840 271 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.44□□□□□ -2.18
ATL3Q6DD88 AP000942.3-201ENST00000603702 160 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 AL138726.1-201ENST00000614873 333 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 TCL6_2.1-201ENST00000615162 119 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 AC015540.1-201ENST00000615828 501 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.44□□□□□ -2.18
ATL3Q6DD88 AC024614.3-201ENST00000637860 256 ntBASIC1.44□□□□□ -2.18
ATL3Q6DD88 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
ATL3Q6DD88 AL159152.1-201ENST00000635019 2587 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 Y_RNA.4-201ENST00000362333 112 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 RNU1-17P-201ENST00000363022 152 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 RNU6-1090P-201ENST00000364065 94 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 RNU6-418P-201ENST00000384035 107 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 SNORA67.2-201ENST00000384300 149 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 MIR300-201ENST00000401138 83 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 SDAD1P3-201ENST00000427380 333 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.43□□□□□ -2.18
ATL3Q6DD88 AL603825.1-201ENST00000438481 80 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 AC245517.4-201ENST00000448601 281 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 AC105313.1-201ENST00000509121 353 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 RN7SKP179-201ENST00000516126 217 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.43□□□□□ -2.18
ATL3Q6DD88 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.43□□□□□ -2.18
ATL3Q6DD88 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.43□□□□□ -2.18
ATL3Q6DD88 MIR5094-201ENST00000578766 85 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 MIR4303-201ENST00000581299 66 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 MIR3672-201ENST00000584290 82 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 MIR3976-201ENST00000606807 139 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.43□□□□□ -2.18
ATL3Q6DD88 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 AC005562.2-201ENST00000618264 111 ntBASIC1.43□□□□□ -2.18
ATL3Q6DD88 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.43□□□□□ -2.18
ATL3Q6DD88 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
ATL3Q6DD88 Y_RNA.135-201ENST00000363439 95 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 Y_RNA.151-201ENST00000363566 112 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 RNU6-968P-201ENST00000384076 107 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 U8.10-201ENST00000384260 133 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 Y_RNA.554-201ENST00000384672 102 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 RNU6-95P-201ENST00000384697 107 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 MIR521-1-201ENST00000384902 87 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 MIR181A1-201ENST00000385026 110 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 MIR549A-201ENST00000385268 96 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
ATL3Q6DD88 RNU6-360P-201ENST00000390944 104 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 MIR1283-1-201ENST00000408494 87 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 ZNF885P-201ENST00000420174 1098 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 AC060773.1-201ENST00000421698 310 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 AC245047.4-201ENST00000433189 144 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 AC004386.2-201ENST00000441858 148 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 AC079354.2-201ENST00000453523 154 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 RN7SKP210-201ENST00000459176 261 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 Y_RNA.673-201ENST00000516306 88 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 RNU6-314P-201ENST00000516574 104 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 RNU6-856P-201ENST00000516959 98 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 ZNF519P2-201ENST00000557032 169 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.42□□□□□ -2.18
ATL3Q6DD88 AC026470.2-201ENST00000561492 181 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.42□□□□□ -2.18
ATL3Q6DD88 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.42□□□□□ -2.18
ATL3Q6DD88 EIF1P4-201ENST00000572664 335 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 AP001485.1-201ENST00000604799 199 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 AC093783.1-201ENST00000612976 329 ntBASIC1.42□□□□□ -2.18
ATL3Q6DD88 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms