Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 MIR1193-201ENST00000408109 78 ntBASIC4.26□□□□□ -1.73
RNF20Q5VTR2 Y_RNA.622-201ENST00000411091 108 ntBASIC4.26□□□□□ -1.73
RNF20Q5VTR2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF20Q5VTR2 RPS4XP2-201ENST00000458402 793 ntBASIC4.26□□□□□ -1.73
RNF20Q5VTR2 RN7SL594P-201ENST00000470590 287 ntBASIC4.26□□□□□ -1.73
RNF20Q5VTR2 RPL32P34-201ENST00000486380 400 ntBASIC4.26□□□□□ -1.73
RNF20Q5VTR2 PDCD5P2-201ENST00000507570 312 ntBASIC4.26□□□□□ -1.73
RNF20Q5VTR2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF20Q5VTR2 RNA5SP76-201ENST00000516277 87 ntBASIC4.26□□□□□ -1.73
RNF20Q5VTR2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.26□□□□□ -1.73
RNF20Q5VTR2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
RNF20Q5VTR2 MIR548AY-201ENST00000617669 107 ntBASIC4.26□□□□□ -1.73
RNF20Q5VTR2 AP001340.1-201ENST00000624405 217 ntBASIC4.26□□□□□ -1.73
RNF20Q5VTR2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
RNF20Q5VTR2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF20Q5VTR2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF20Q5VTR2 AC068647.1-201ENST00000489539 2265 ntBASIC4.25□□□□□ -1.73
RNF20Q5VTR2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF20Q5VTR2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RNF20Q5VTR2 RNU1-57P-201ENST00000384491 166 ntBASIC4.25□□□□□ -1.73
RNF20Q5VTR2 RNU6-429P-201ENST00000384582 108 ntBASIC4.25□□□□□ -1.73
RNF20Q5VTR2 SNORA36B-201ENST00000410438 131 ntBASIC4.25□□□□□ -1.73
RNF20Q5VTR2 RBMY2UP-201ENST00000453474 324 ntBASIC4.25□□□□□ -1.73
RNF20Q5VTR2 SNORD105B-201ENST00000458770 79 ntBASIC4.25□□□□□ -1.73
RNF20Q5VTR2 RAC1P5-201ENST00000512182 576 ntBASIC4.25□□□□□ -1.73
RNF20Q5VTR2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.25□□□□□ -1.73
RNF20Q5VTR2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF20Q5VTR2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF20Q5VTR2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF20Q5VTR2 AL513302.2-201ENST00000562313 1842 ntBASIC4.25□□□□□ -1.73
RNF20Q5VTR2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF20Q5VTR2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF20Q5VTR2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF20Q5VTR2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF20Q5VTR2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF20Q5VTR2 RNU6-915P-201ENST00000364943 103 ntBASIC4.24□□□□□ -1.73
RNF20Q5VTR2 MIR518C-201ENST00000384822 101 ntBASIC4.24□□□□□ -1.73
RNF20Q5VTR2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RNF20Q5VTR2 AL512604.1-201ENST00000404812 257 ntBASIC4.24□□□□□ -1.73
RNF20Q5VTR2 RNU6-1064P-201ENST00000410626 104 ntBASIC4.24□□□□□ -1.73
RNF20Q5VTR2 AL035423.1-201ENST00000420331 213 ntBASIC4.24□□□□□ -1.73
RNF20Q5VTR2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF20Q5VTR2 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.24□□□□□ -1.73
RNF20Q5VTR2 RNU7-115P-201ENST00000516433 55 ntBASIC4.24□□□□□ -1.73
RNF20Q5VTR2 MIR5047-201ENST00000579212 100 ntBASIC4.24□□□□□ -1.73
RNF20Q5VTR2 U7.2-201ENST00000607576 63 ntBASIC4.24□□□□□ -1.73
RNF20Q5VTR2 AC012531.5-201ENST00000611375 151 ntBASIC4.24□□□□□ -1.73
RNF20Q5VTR2 MIR6129-201ENST00000616087 109 ntBASIC4.24□□□□□ -1.73
RNF20Q5VTR2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.24□□□□□ -1.73
RNF20Q5VTR2 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF20Q5VTR2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF20Q5VTR2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF20Q5VTR2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF20Q5VTR2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RNF20Q5VTR2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF20Q5VTR2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF20Q5VTR2 MFSD8-236ENST00000641509 4050 ntBASIC4.23□□□□□ -1.73
RNF20Q5VTR2 SNORD9-201ENST00000362566 104 ntBASIC4.23□□□□□ -1.73
RNF20Q5VTR2 RNU6-750P-201ENST00000390946 107 ntBASIC4.23□□□□□ -1.73
RNF20Q5VTR2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF20Q5VTR2 AC006539.3-201ENST00000454258 129 ntBASIC4.23□□□□□ -1.73
RNF20Q5VTR2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF20Q5VTR2 RNU7-23P-201ENST00000459465 62 ntBASIC4.23□□□□□ -1.73
RNF20Q5VTR2 YWHAEP4-201ENST00000505390 198 ntBASIC4.23□□□□□ -1.73
RNF20Q5VTR2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RNF20Q5VTR2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
RNF20Q5VTR2 RN7SKP18-201ENST00000516005 275 ntBASIC4.23□□□□□ -1.73
RNF20Q5VTR2 AC026241.1-201ENST00000517873 2142 ntBASIC4.23□□□□□ -1.73
RNF20Q5VTR2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF20Q5VTR2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF20Q5VTR2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RNF20Q5VTR2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF20Q5VTR2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF20Q5VTR2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RNF20Q5VTR2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF20Q5VTR2 MFSD8-233ENST00000641482 4860 ntBASIC4.22□□□□□ -1.73
RNF20Q5VTR2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF20Q5VTR2 Y_RNA.251-201ENST00000364551 99 ntBASIC4.22□□□□□ -1.73
RNF20Q5VTR2 RNU6-1082P-201ENST00000364574 107 ntBASIC4.22□□□□□ -1.73
RNF20Q5VTR2 Y_RNA.294-201ENST00000364916 102 ntBASIC4.22□□□□□ -1.73
RNF20Q5VTR2 SNORD116-13-201ENST00000384408 92 ntBASIC4.22□□□□□ -1.73
RNF20Q5VTR2 Y_RNA.563-201ENST00000384707 108 ntBASIC4.22□□□□□ -1.73
RNF20Q5VTR2 MIR1185-2-201ENST00000408687 86 ntBASIC4.22□□□□□ -1.73
RNF20Q5VTR2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF20Q5VTR2 HSPE1P13-201ENST00000451143 297 ntBASIC4.22□□□□□ -1.73
RNF20Q5VTR2 AP002884.2-201ENST00000471647 395 ntBASIC4.22□□□□□ -1.73
RNF20Q5VTR2 RPL36AP48-201ENST00000485521 314 ntBASIC4.22□□□□□ -1.73
RNF20Q5VTR2 RNU6-1337P-201ENST00000516525 95 ntBASIC4.22□□□□□ -1.73
RNF20Q5VTR2 AC026333.2-201ENST00000542164 106 ntBASIC4.22□□□□□ -1.73
RNF20Q5VTR2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF20Q5VTR2 AC022149.2-201ENST00000621061 203 ntBASIC4.22□□□□□ -1.73
RNF20Q5VTR2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF20Q5VTR2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF20Q5VTR2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RNF20Q5VTR2 RNU6-235P-201ENST00000362644 107 ntBASIC4.21□□□□□ -1.74
RNF20Q5VTR2 SNORA51.4-201ENST00000364993 124 ntBASIC4.21□□□□□ -1.74
RNF20Q5VTR2 RNY4P18-201ENST00000391107 89 ntBASIC4.21□□□□□ -1.74
RNF20Q5VTR2 SNORA75.5-201ENST00000391291 81 ntBASIC4.21□□□□□ -1.74
RNF20Q5VTR2 AL355796.1-201ENST00000406706 323 ntBASIC4.21□□□□□ -1.74
RNF20Q5VTR2 CYCSP19-201ENST00000411715 316 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms