Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 Y_RNA.557-201ENST00000384680 107 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 RNU6-1105P-201ENST00000384774 107 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 MIR186-201ENST00000384988 86 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 MIR628-201ENST00000385229 95 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 AL023284.1-201ENST00000403956 276 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 HMGB3P2-201ENST00000411913 584 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 AC114482.1-201ENST00000418010 247 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 MTND3P2-201ENST00000438452 342 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 AC010095.1-201ENST00000443543 144 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 RNU6-475P-201ENST00000516073 104 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 AC040926.1-201ENST00000530195 238 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 MIR4658-201ENST00000584344 65 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 AC073410.2-201ENST00000603240 332 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 Z98751.3-201ENST00000604447 521 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 RMST_6.1-201ENST00000611980 203 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 uc_338.14-201ENST00000613162 166 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 AC245884.12-201ENST00000615364 59 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 AP000560.1-201ENST00000624150 1937 ntBASIC2.62□□□□□ -1.99
TTC39AQ5SRH9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 SNORA38-201ENST00000363946 132 ntBASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 U8.10-201ENST00000384260 133 ntBASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 MIR549A-201ENST00000385268 96 ntBASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 SNORA26.3-201ENST00000391119 136 ntBASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 AC012306.1-201ENST00000423267 114 ntBASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 AIMP1P2-201ENST00000425294 312 ntBASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 AL358176.2-201ENST00000425769 204 ntBASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 snoU13.26-201ENST00000459452 105 ntBASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 SNORA40.14-201ENST00000516543 86 ntBASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 RNA5SP82-201ENST00000516707 92 ntBASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 AC115990.1-201ENST00000526957 301 ntBASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 AC016256.1-201ENST00000547971 354 ntBASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 Z75746.1-201ENST00000440243 2080 ntBASIC2.61□□□□□ -1.99
TTC39AQ5SRH9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 MIRLET7G-201ENST00000362280 84 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 Y_RNA.133-201ENST00000363428 110 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 SNORD115-32-201ENST00000364079 82 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 SNORA51.11-201ENST00000384442 131 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 MIR153-2-201ENST00000385225 87 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 SNORA48.3-201ENST00000391081 134 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 AL590556.1-201ENST00000423231 483 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 MTCO3P8-201ENST00000453691 755 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 AP000870.1-201ENST00000472927 406 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 AC107032.1-201ENST00000485945 480 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 AC132942.1-201ENST00000486753 483 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 HMGB1P35-201ENST00000503360 598 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 Y_RNA.721-201ENST00000517207 102 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 AC079598.5-201ENST00000547460 117 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 AC008269.2-201ENST00000561915 1105 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 UBL5P4-201ENST00000562584 236 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 MIR4765-201ENST00000585007 77 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 AL138825.1-201ENST00000618587 192 ntBASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
TTC39AQ5SRH9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 AL359854.1-201ENST00000614203 1594 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 RNU1-57P-201ENST00000384491 166 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 RNU6-541P-201ENST00000384709 110 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 CYCSP48-201ENST00000417124 323 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 AC097463.2-201ENST00000421074 142 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 USP9YP16-201ENST00000430287 407 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 MICF-203ENST00000432679 129 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 USP9YP23-201ENST00000455085 407 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 AL139109.1-201ENST00000455491 297 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 AL121594.1-201ENST00000475906 575 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 AC022868.1-201ENST00000517767 391 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 AC027288.2-201ENST00000553028 243 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 AL117187.1-201ENST00000555482 181 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 AC009127.3-201ENST00000570531 403 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 AC090617.3-201ENST00000573670 475 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 AC016727.2-201ENST00000603988 621 ntBASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.59□□□□□ -1.99
TTC39AQ5SRH9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.59□□□□□ -2
TTC39AQ5SRH9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.58□□□□□ -2
TTC39AQ5SRH9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
TTC39AQ5SRH9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
TTC39AQ5SRH9 snoU2_19.1-201ENST00000362361 80 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 RNU6-655P-201ENST00000362858 107 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms