Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 RNA5SP289-201ENST00000362332 137 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 SNORA25.6-201ENST00000364121 118 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 RNU6-546P-201ENST00000383991 107 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 RNU6-308P-201ENST00000390957 107 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 MIR190B-201ENST00000401119 79 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 MIR1302-11-201ENST00000408051 138 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 MIR1302-9-201ENST00000408365 138 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 MIR1302-10-201ENST00000408734 138 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 AL356379.1-201ENST00000414105 126 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 PMCHL1-202ENST00000423102 261 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 AC007215.1-201ENST00000464893 276 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 AC018868.1-201ENST00000491307 315 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 RNA5SP54-201ENST00000516951 92 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 AC233702.2-202ENST00000562547 291 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 AC090517.1-201ENST00000569307 266 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 MIR3171-201ENST00000584270 74 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 AL356575.1-201ENST00000603008 283 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 AC016727.2-201ENST00000603988 621 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 MIR1302-2-201ENST00000607096 138 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 AL162373.1-201ENST00000620433 407 ntBASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.22□□□□□ -2.05
KRTCAP3Q53RY4 ZNF702P-202ENST00000434269 1966 ntBASIC2.21□□□□□ -2.05
KRTCAP3Q53RY4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 Y_RNA.112-201ENST00000363250 102 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 RNU6-137P-201ENST00000363680 108 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 SNORD115-8-201ENST00000363856 82 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 SNORD115-38-201ENST00000365037 82 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 Y_RNA.445-201ENST00000384168 102 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 Y_RNA.496-201ENST00000384444 101 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 SNORA80E-201ENST00000384744 137 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 MIR487A-201ENST00000385009 80 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 MIR625-201ENST00000385047 85 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 MIR504-201ENST00000385065 83 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 MIR29C-201ENST00000385231 88 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 MIR548P-201ENST00000408336 84 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 MIR320B2-201ENST00000408479 138 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 RNU6-1156P-201ENST00000410365 100 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 DPH3P2-201ENST00000422618 250 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 MRPS18CP6-201ENST00000423587 223 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 AC018865.2-201ENST00000423631 129 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 AC099799.1-201ENST00000439809 192 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 snoU13.15-201ENST00000459407 104 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 Y_RNA.631-201ENST00000459607 101 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 AC132942.1-201ENST00000486753 483 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 AC234781.5-201ENST00000508429 271 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 RNU6-976P-201ENST00000516086 111 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 AC021269.2-201ENST00000532318 330 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 AC022616.8-201ENST00000533569 253 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 SNRPGP18-201ENST00000553000 214 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 AC027288.2-201ENST00000553028 243 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 AC026470.2-201ENST00000561492 181 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 MIR4648-201ENST00000580107 72 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 MIR1244-1-201ENST00000612829 85 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 AC007742.2-201ENST00000618226 398 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 MIR1244-3-201ENST00000635744 85 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 MIR1244-2-201ENST00000636449 85 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 MIR1244-4-202ENST00000636813 85 ntBASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
KRTCAP3Q53RY4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 Y_RNA.106-201ENST00000363189 100 ntBASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 RNU6-26P-201ENST00000383985 107 ntBASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 Y_RNA.428-201ENST00000384078 102 ntBASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 MIR518A2-201ENST00000384966 87 ntBASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 AC105758.1-201ENST00000506038 399 ntBASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 RNU7-4P-201ENST00000516961 62 ntBASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 RNU6-58P-201ENST00000517143 103 ntBASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 SNRPGP20-201ENST00000604477 205 ntBASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 RPL17P51-201ENST00000605218 238 ntBASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 AL627230.6-201ENST00000611129 280 ntBASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 AC091925.1-201ENST00000623204 462 ntBASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 AC091932.3-201ENST00000624223 323 ntBASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
KRTCAP3Q53RY4 BX322639.1-202ENST00000423987 2213 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 AC016717.2-201ENST00000609089 5141 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 ZNF204P-201ENST00000416749 2397 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 Y_RNA.252-201ENST00000364556 101 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 Y_RNA.314-201ENST00000365114 102 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms