Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 MTCO3P10-201ENST00000455912 772 ntBASIC1.84□□□□□ -2.11
SIX1Q15475 snoU13.30-201ENST00000458951 104 ntBASIC1.84□□□□□ -2.11
SIX1Q15475 Y_RNA.653-201ENST00000459091 95 ntBASIC1.84□□□□□ -2.11
SIX1Q15475 SNORD19B-201ENST00000459623 84 ntBASIC1.84□□□□□ -2.11
SIX1Q15475 AC097473.1-201ENST00000508142 408 ntBASIC1.84□□□□□ -2.11
SIX1Q15475 AL590705.4-201ENST00000532209 134 ntBASIC1.84□□□□□ -2.11
SIX1Q15475 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.84□□□□□ -2.11
SIX1Q15475 AC015712.3-201ENST00000559380 164 ntBASIC1.84□□□□□ -2.11
SIX1Q15475 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.84□□□□□ -2.11
SIX1Q15475 AC104581.2-201ENST00000572227 430 ntBASIC1.84□□□□□ -2.11
SIX1Q15475 MIR4795-201ENST00000584182 89 ntBASIC1.84□□□□□ -2.11
SIX1Q15475 C8orf59P2-201ENST00000603441 271 ntBASIC1.84□□□□□ -2.11
SIX1Q15475 RMST_6.1-201ENST00000611980 203 ntBASIC1.84□□□□□ -2.11
SIX1Q15475 AC104985.2-201ENST00000620598 500 ntBASIC1.84□□□□□ -2.11
SIX1Q15475 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
SIX1Q15475 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
SIX1Q15475 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SIX1Q15475 RNU4-79P-201ENST00000362764 141 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 Y_RNA.58-201ENST00000362807 102 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 RNY1P16-201ENST00000363063 111 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 Y_RNA.154-201ENST00000363624 102 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 RNY3P1-201ENST00000365085 102 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 RNY3-201ENST00000365484 102 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 RNU6-890P-201ENST00000384121 107 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 MIR32-201ENST00000384965 70 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 MTCO2P27-201ENST00000420740 428 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 MTCO3P29-201ENST00000432119 779 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.83□□□□□ -2.12
SIX1Q15475 ELOCP24-201ENST00000456370 334 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 RNU7-152P-201ENST00000458982 64 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 AC132942.1-201ENST00000486753 483 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 AC068781.1-201ENST00000488231 618 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 AC110588.1-201ENST00000559699 137 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 AC024614.2-201ENST00000577584 372 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 7SK.7-201ENST00000603504 247 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 AC133104.2-201ENST00000615272 193 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 AL132822.1-201ENST00000617063 513 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 AC012640.5-201ENST00000623897 319 ntBASIC1.83□□□□□ -2.12
SIX1Q15475 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SIX1Q15475 SNORD115-8-201ENST00000363856 82 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 SNORD115-38-201ENST00000365037 82 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 RNU6-17P-201ENST00000384245 107 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 RNU1-148P-201ENST00000384472 162 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 Y_RNA.509-201ENST00000384506 99 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 RNU6-18P-201ENST00000384527 107 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 MIR487A-201ENST00000385009 80 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 MIR153-2-201ENST00000385225 87 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 SNORA12.2-201ENST00000391040 156 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 RNU2-40P-201ENST00000410833 196 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 AL353997.1-201ENST00000432936 108 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 AC236972.2-201ENST00000434979 310 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 RPL30P15-201ENST00000457129 321 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 AC007215.1-201ENST00000464893 276 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 RPS27P21-201ENST00000486977 252 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.82□□□□□ -2.12
SIX1Q15475 RNU7-175P-201ENST00000515915 61 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 Y_RNA.675-201ENST00000516389 149 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 RNU6-965P-201ENST00000516721 96 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 RNU6-548P-201ENST00000517083 115 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 AC034114.1-201ENST00000520293 285 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 NDUFA5P6-201ENST00000542110 379 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.82□□□□□ -2.12
SIX1Q15475 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.82□□□□□ -2.12
SIX1Q15475 AC016727.2-201ENST00000603988 621 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 AC025754.2-201ENST00000606491 432 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.82□□□□□ -2.12
SIX1Q15475 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SIX1Q15475 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SIX1Q15475 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SIX1Q15475 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.81□□□□□ -2.12
SIX1Q15475 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SIX1Q15475 AL356292.1-201ENST00000283110 373 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.81□□□□□ -2.12
SIX1Q15475 Y_RNA.405-201ENST00000383979 100 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 RNU6-26P-201ENST00000383985 107 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 Y_RNA.451-201ENST00000384200 100 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 Y_RNA.524-201ENST00000384564 100 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 Y_RNA.561-201ENST00000384694 100 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 U3.40-201ENST00000408706 208 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 AF228730.4-201ENST00000421457 183 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SIX1Q15475 RPL23AP50-201ENST00000434149 455 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.81□□□□□ -2.12
SIX1Q15475 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.81□□□□□ -2.12
SIX1Q15475 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.81□□□□□ -2.12
SIX1Q15475 MIR449C-201ENST00000516047 92 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 RNU6-667P-201ENST00000517186 102 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 DEFB131C-201ENST00000528817 165 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.81□□□□□ -2.12
SIX1Q15475 CYCSP26-201ENST00000534107 320 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.81□□□□□ -2.12
SIX1Q15475 AC027288.2-201ENST00000553028 243 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.81□□□□□ -2.12
SIX1Q15475 AC090517.1-201ENST00000569307 266 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.81□□□□□ -2.12
SIX1Q15475 RPL17P51-201ENST00000605218 238 ntBASIC1.81□□□□□ -2.12
SIX1Q15475 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.81□□□□□ -2.12
SIX1Q15475 MIR1248-201ENST00000629190 106 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms