Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 AGGF1P4-201ENST00000568249 801 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 AC137590.2-201ENST00000619709 240 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.8□□□□□ -2.28
CACNA1SQ13698 AL359697.1-201ENST00000624879 587 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 MTND4P14-201ENST00000435799 1354 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 AC008163.1-202ENST00000636004 2889 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CACNA1SQ13698 MIR340-201ENST00000362125 95 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 RNU6-545P-201ENST00000362681 104 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 RNU1-96P-201ENST00000364163 162 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 RNU6-1187P-201ENST00000364771 110 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 RNU6-336P-201ENST00000364891 107 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 SNORD73A-201ENST00000386062 65 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 RNA5SP511-201ENST00000410487 115 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 TOMM22P2-201ENST00000430735 237 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 MTCO3P29-201ENST00000432119 779 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.79□□□□□ -2.28
CACNA1SQ13698 AC145146.1-201ENST00000496370 254 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 AP002963.1-201ENST00000530590 184 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 AP003034.1-201ENST00000534621 422 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.79□□□□□ -2.28
CACNA1SQ13698 AL162424.1-201ENST00000602325 221 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 AL391262.2-201ENST00000622466 494 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 MIR338-201ENST00000636369 67 ntBASIC0.79□□□□□ -2.28
CACNA1SQ13698 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.79□□□□□ -2.28
CACNA1SQ13698 RNA5SP347-201ENST00000362445 119 ntBASIC0.78□□□□□ -2.28
CACNA1SQ13698 RNU6-784P-201ENST00000384330 106 ntBASIC0.78□□□□□ -2.28
CACNA1SQ13698 RNU6-296P-201ENST00000384608 107 ntBASIC0.78□□□□□ -2.28
CACNA1SQ13698 MIR19B1-201ENST00000384829 87 ntBASIC0.78□□□□□ -2.28
CACNA1SQ13698 COX6CP10-201ENST00000416832 224 ntBASIC0.78□□□□□ -2.28
CACNA1SQ13698 MTCO2P34-201ENST00000421994 607 ntBASIC0.78□□□□□ -2.28
CACNA1SQ13698 AC245047.4-201ENST00000433189 144 ntBASIC0.78□□□□□ -2.28
CACNA1SQ13698 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.78□□□□□ -2.28
CACNA1SQ13698 AC027119.1-201ENST00000440877 241 ntBASIC0.78□□□□□ -2.28
CACNA1SQ13698 RPS27AP8-201ENST00000452665 445 ntBASIC0.78□□□□□ -2.28
CACNA1SQ13698 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.78□□□□□ -2.28
CACNA1SQ13698 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.78□□□□□ -2.28
CACNA1SQ13698 RNU2-34P-201ENST00000516534 121 ntBASIC0.78□□□□□ -2.28
CACNA1SQ13698 RNA5SP481-201ENST00000516814 122 ntBASIC0.78□□□□□ -2.28
CACNA1SQ13698 AC025449.1-201ENST00000603896 529 ntBASIC0.78□□□□□ -2.28
CACNA1SQ13698 Z98751.3-201ENST00000604447 521 ntBASIC0.78□□□□□ -2.28
CACNA1SQ13698 AC093424.1-201ENST00000604999 338 ntBASIC0.78□□□□□ -2.28
CACNA1SQ13698 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
CACNA1SQ13698 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
CACNA1SQ13698 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.78□□□□□ -2.29
CACNA1SQ13698 RNU6-968P-201ENST00000384076 107 ntBASIC0.78□□□□□ -2.29
CACNA1SQ13698 RNU6-190P-201ENST00000384154 102 ntBASIC0.78□□□□□ -2.29
CACNA1SQ13698 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.78□□□□□ -2.29
CACNA1SQ13698 BX295541.1-201ENST00000417774 250 ntBASIC0.78□□□□□ -2.29
CACNA1SQ13698 AL117339.3-201ENST00000418733 162 ntBASIC0.78□□□□□ -2.29
CACNA1SQ13698 AC012306.1-201ENST00000423267 114 ntBASIC0.78□□□□□ -2.29
CACNA1SQ13698 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.78□□□□□ -2.29
CACNA1SQ13698 AC007215.1-201ENST00000464893 276 ntBASIC0.78□□□□□ -2.29
CACNA1SQ13698 RNU6-948P-201ENST00000516374 107 ntBASIC0.78□□□□□ -2.29
CACNA1SQ13698 AC024995.1-201ENST00000523014 93 ntBASIC0.78□□□□□ -2.29
CACNA1SQ13698 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.78□□□□□ -2.29
CACNA1SQ13698 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.78□□□□□ -2.29
CACNA1SQ13698 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.78□□□□□ -2.29
CACNA1SQ13698 AC099654.5-201ENST00000636479 350 ntBASIC0.78□□□□□ -2.29
CACNA1SQ13698 AC068137.4-201ENST00000638485 296 ntBASIC0.78□□□□□ -2.29
CACNA1SQ13698 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CACNA1SQ13698 SNORD115-8-201ENST00000363856 82 ntBASIC0.77□□□□□ -2.29
CACNA1SQ13698 SNORD115-38-201ENST00000365037 82 ntBASIC0.77□□□□□ -2.29
CACNA1SQ13698 RNU6-975P-201ENST00000384296 105 ntBASIC0.77□□□□□ -2.29
CACNA1SQ13698 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.77□□□□□ -2.29
CACNA1SQ13698 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.77□□□□□ -2.29
CACNA1SQ13698 SNRPGP7-201ENST00000469016 106 ntBASIC0.77□□□□□ -2.29
CACNA1SQ13698 SCARNA24.1-201ENST00000516465 137 ntBASIC0.77□□□□□ -2.29
CACNA1SQ13698 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.77□□□□□ -2.29
CACNA1SQ13698 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.77□□□□□ -2.29
CACNA1SQ13698 AL512310.8-201ENST00000550183 120 ntBASIC0.77□□□□□ -2.29
CACNA1SQ13698 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.77□□□□□ -2.29
CACNA1SQ13698 MIR4661-201ENST00000582720 75 ntBASIC0.77□□□□□ -2.29
CACNA1SQ13698 AC040904.1-201ENST00000590850 223 ntBASIC0.77□□□□□ -2.29
CACNA1SQ13698 HULC.1-201ENST00000612720 240 ntBASIC0.77□□□□□ -2.29
CACNA1SQ13698 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CACNA1SQ13698 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
CACNA1SQ13698 RNU6-552P-201ENST00000362869 119 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 RNU6-137P-201ENST00000363680 108 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 RNU6-1322P-201ENST00000364309 107 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 RNU6-417P-201ENST00000384712 107 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 SNORA16.2-201ENST00000390991 127 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 MTATP6P18-201ENST00000417994 673 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 AL590135.1-201ENST00000422215 156 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 AC019205.3-201ENST00000424573 156 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 SNRPEP8-201ENST00000442866 260 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 AC073910.1-201ENST00000445047 438 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 AC016700.2-201ENST00000446011 156 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.76□□□□□ -2.29
CACNA1SQ13698 AC015911.1-201ENST00000495111 156 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 AC091435.1-201ENST00000505442 584 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 AC005178.1-201ENST00000508392 440 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.76□□□□□ -2.29
CACNA1SQ13698 RNU2-69P-201ENST00000516061 100 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 RNU7-40P-201ENST00000516397 64 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 RNA5SP437-201ENST00000517249 129 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 SUMO2P16-201ENST00000519475 264 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.76□□□□□ -2.29
CACNA1SQ13698 MIR4528-201ENST00000577763 90 ntBASIC0.76□□□□□ -2.29
CACNA1SQ13698 AC110760.3-201ENST00000598794 467 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms