Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNA5SP330-201ENST00000517096 96 ntBASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 AF235103.2-201ENST00000525753 346 ntBASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 AP003716.2-201ENST00000528260 108 ntBASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 AC005730.3-201ENST00000583067 366 ntBASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 MIR4305-201ENST00000583252 102 ntBASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 MTATP6P2-201ENST00000603319 678 ntBASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 AC104408.1-201ENST00000605241 170 ntBASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 AC006927.2-201ENST00000639256 389 ntBASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 SNORD114-26-201ENST00000363543 72 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 RNU6-769P-201ENST00000384407 104 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 SNORA40.2-201ENST00000390847 128 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 MIR208B-201ENST00000401172 77 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 SNORA40.8-201ENST00000411034 126 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 MTND3P17-201ENST00000416968 344 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 AC074290.1-201ENST00000448883 135 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 RPL23AP54-201ENST00000495129 419 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 RNU6-377P-201ENST00000515965 102 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 AC036111.3-201ENST00000526389 112 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 AC141557.1-201ENST00000540982 400 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 BNIP3P26-201ENST00000600827 554 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 uc_338.34-201ENST00000617467 174 ntBASIC-0.3□□□□□ -2.46
HIST1H1AQ02539 SNORD114-5-201ENST00000362928 70 ntBASIC-0.31□□□□□ -2.46
HIST1H1AQ02539 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.31□□□□□ -2.46
HIST1H1AQ02539 RNU6-371P-201ENST00000364283 108 ntBASIC-0.31□□□□□ -2.46
HIST1H1AQ02539 RNU6-302P-201ENST00000365249 107 ntBASIC-0.31□□□□□ -2.46
HIST1H1AQ02539 RPL37P21-201ENST00000435890 276 ntBASIC-0.31□□□□□ -2.46
HIST1H1AQ02539 AC004854.1-201ENST00000440356 349 ntBASIC-0.31□□□□□ -2.46
HIST1H1AQ02539 ELOCP24-201ENST00000456370 334 ntBASIC-0.31□□□□□ -2.46
HIST1H1AQ02539 RNU7-94P-201ENST00000459576 63 ntBASIC-0.31□□□□□ -2.46
HIST1H1AQ02539 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.31□□□□□ -2.46
HIST1H1AQ02539 MTND3P19-201ENST00000603825 345 ntBASIC-0.31□□□□□ -2.46
HIST1H1AQ02539 BCRP9-201ENST00000605312 388 ntBASIC-0.31□□□□□ -2.46
HIST1H1AQ02539 AL139286.2-201ENST00000606838 396 ntBASIC-0.31□□□□□ -2.46
HIST1H1AQ02539 RNU6-514P-201ENST00000384208 107 ntBASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 AC093850.1-201ENST00000454121 251 ntBASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 SNORA40.12-201ENST00000516329 111 ntBASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 RNU7-51P-201ENST00000516560 62 ntBASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 DEFB131C-201ENST00000528817 165 ntBASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 MIR4300-201ENST00000581016 96 ntBASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 PART1_2.1-201ENST00000612397 250 ntBASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 AL450472.1-202ENST00000637286 180 ntBASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 AL445523.1-201ENST00000451184 1362 ntBASIC-0.32□□□□□ -2.46
HIST1H1AQ02539 AC073343.1-201ENST00000328239 651 ntBASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 RNA5SP517-201ENST00000364724 117 ntBASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 RNU6-424P-201ENST00000384367 105 ntBASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 MIR1185-1-201ENST00000408598 86 ntBASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 AL663109.1-201ENST00000411498 844 ntBASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 AC090960.1-201ENST00000421072 306 ntBASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 RNU6-123P-201ENST00000516163 102 ntBASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 AC109479.2-201ENST00000517842 174 ntBASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 AC068587.4-201ENST00000533893 186 ntBASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 AC091965.4-201ENST00000607691 587 ntBASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 AL031667.3-201ENST00000620124 655 ntBASIC-0.33□□□□□ -2.46
HIST1H1AQ02539 RNY4P24-201ENST00000362735 96 ntBASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 RPS3AP3-201ENST00000411933 242 ntBASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 AC106883.1-201ENST00000418805 562 ntBASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 CALM2P4-201ENST00000430810 426 ntBASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 SEPT7P4-201ENST00000437076 306 ntBASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 AC010486.2-201ENST00000505572 483 ntBASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 AC117522.1-201ENST00000509821 380 ntBASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 MTCO3P27-201ENST00000514397 196 ntBASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 LRRC34P2-201ENST00000514850 553 ntBASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 AC112693.2-201ENST00000556538 232 ntBASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 AC122133.1-201ENST00000613964 233 ntBASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 MIR2909-201ENST00000617113 69 ntBASIC-0.34□□□□□ -2.46
HIST1H1AQ02539 MIR1-1-201ENST00000362147 71 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms