Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SNORA25.18-201ENST00000607153 114 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AL355073.2-201ENST00000612106 557 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.2□□□□□ -2.44
HSPG2P98160 AL159153.1-201ENST00000619688 317 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 BX322639.1-202ENST00000423987 2213 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 MTND5P33-201ENST00000571250 1450 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
HSPG2P98160 MIR377-201ENST00000362145 69 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 SNORA72.1-201ENST00000363485 129 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
HSPG2P98160 MIR454-201ENST00000390180 115 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 RNA5SP390-201ENST00000410191 113 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.2□□□□□ -2.44
HSPG2P98160 RNA5SP94-201ENST00000516917 108 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 RNU6-856P-201ENST00000516959 98 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AC025678.1-201ENST00000567861 338 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 RNU6-94P-201ENST00000607728 107 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 SCARNA4-202ENST00000625402 129 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 MIR6079-201ENST00000635807 62 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 RNU6-369P-201ENST00000362515 102 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AL590084.2-201ENST00000401481 382 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.2□□□□□ -2.44
HSPG2P98160 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.2□□□□□ -2.44
HSPG2P98160 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.2□□□□□ -2.44
HSPG2P98160 AC023442.1-201ENST00000531247 422 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.2□□□□□ -2.44
HSPG2P98160 AL451064.1-201ENST00000607718 471 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 RNA5SP48-201ENST00000363969 126 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 RNU6-432P-201ENST00000384196 109 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.21□□□□□ -2.44
HSPG2P98160 USP9YP14-201ENST00000430663 563 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.21□□□□□ -2.44
HSPG2P98160 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.21□□□□□ -2.44
HSPG2P98160 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.21□□□□□ -2.44
HSPG2P98160 ELOCP30-201ENST00000447108 299 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 AC016925.1-201ENST00000458303 298 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 AC104629.1-201ENST00000494226 508 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 MTCO3P28-201ENST00000513351 515 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 RNU6-123P-201ENST00000516163 102 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.21□□□□□ -2.44
HSPG2P98160 AC023824.3-201ENST00000569003 562 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 MIR4637-201ENST00000582405 84 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 MIR4324-201ENST00000584846 72 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 AL358072.1-201ENST00000604156 575 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.21□□□□□ -2.44
HSPG2P98160 AL359697.1-201ENST00000624879 587 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 RNU6-78P-201ENST00000362897 107 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 MIR10A-201ENST00000385043 110 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 AL359634.1-202ENST00000404721 284 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 AL354692.1-201ENST00000423044 315 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 AC073910.1-201ENST00000445047 438 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
HSPG2P98160 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.21□□□□□ -2.44
HSPG2P98160 AP002453.2-201ENST00000533503 320 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
HSPG2P98160 AC122134.1-202ENST00000569111 1201 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 MIR3923-201ENST00000579521 83 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.21□□□□□ -2.44
HSPG2P98160 MIR4753-201ENST00000585119 83 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 AL034555.1-201ENST00000604816 211 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.21□□□□□ -2.44
HSPG2P98160 RNU6-562P-201ENST00000362731 107 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 RNU6-839P-201ENST00000363347 108 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 MIR892B-201ENST00000401279 77 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 RNU4-22P-201ENST00000411058 166 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.21□□□□□ -2.44
HSPG2P98160 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
HSPG2P98160 AC022447.4-201ENST00000504053 364 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 MTCO3P15-201ENST00000526563 574 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.21□□□□□ -2.44
HSPG2P98160 AC018462.2-201ENST00000605375 395 ntBASIC-0.21□□□□□ -2.44
HSPG2P98160 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
HSPG2P98160 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 RNU6-142P-201ENST00000384019 107 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 SNORD111-201ENST00000408139 94 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.22□□□□□ -2.44
HSPG2P98160 AC244670.1-201ENST00000436879 112 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.22□□□□□ -2.44
HSPG2P98160 AC091021.1-201ENST00000468051 388 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.22□□□□□ -2.44
HSPG2P98160 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 RN7SKP164-201ENST00000516138 266 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.22□□□□□ -2.44
HSPG2P98160 AC011921.3-201ENST00000605540 361 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 snoZ40.1-201ENST00000364540 72 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms