Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.34□□□□□ -2.46
PRKDCP78527 AC011921.3-201ENST00000605540 361 ntBASIC-0.34□□□□□ -2.46
PRKDCP78527 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.34□□□□□ -2.46
PRKDCP78527 RNU6-679P-201ENST00000391003 106 ntBASIC-0.34□□□□□ -2.46
PRKDCP78527 AC007215.1-201ENST00000464893 276 ntBASIC-0.34□□□□□ -2.46
PRKDCP78527 AC010376.1-201ENST00000522101 334 ntBASIC-0.34□□□□□ -2.46
PRKDCP78527 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.34□□□□□ -2.46
PRKDCP78527 MTND5P33-201ENST00000571250 1450 ntBASIC-0.34□□□□□ -2.46
PRKDCP78527 AC092809.3-201ENST00000415453 231 ntBASIC-0.34□□□□□ -2.46
PRKDCP78527 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.34□□□□□ -2.46
PRKDCP78527 AC020550.1-201ENST00000447385 163 ntBASIC-0.34□□□□□ -2.46
PRKDCP78527 AC005042.3-201ENST00000453230 174 ntBASIC-0.34□□□□□ -2.46
PRKDCP78527 AC090502.2-201ENST00000549267 280 ntBASIC-0.34□□□□□ -2.46
PRKDCP78527 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.34□□□□□ -2.46
PRKDCP78527 MIR892B-201ENST00000401279 77 ntBASIC-0.35□□□□□ -2.46
PRKDCP78527 RPL17P35-201ENST00000432217 549 ntBASIC-0.35□□□□□ -2.46
PRKDCP78527 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.35□□□□□ -2.46
PRKDCP78527 RNU6-572P-201ENST00000516724 80 ntBASIC-0.35□□□□□ -2.46
PRKDCP78527 RNU2-46P-201ENST00000517038 113 ntBASIC-0.35□□□□□ -2.46
PRKDCP78527 AC105029.1-201ENST00000520250 669 ntBASIC-0.35□□□□□ -2.46
PRKDCP78527 AP002001.1-203ENST00000534002 267 ntBASIC-0.35□□□□□ -2.46
PRKDCP78527 AC023824.3-201ENST00000569003 562 ntBASIC-0.35□□□□□ -2.46
PRKDCP78527 RPL17P51-201ENST00000605218 238 ntBASIC-0.35□□□□□ -2.46
PRKDCP78527 RNU6-819P-201ENST00000364116 107 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 SNORA32.2-201ENST00000384049 122 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 MTND3P17-201ENST00000416968 344 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.35□□□□□ -2.47
PRKDCP78527 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.35□□□□□ -2.47
PRKDCP78527 AC079354.2-201ENST00000453523 154 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 FABP5P15-201ENST00000453566 214 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 RNU2-34P-201ENST00000516534 121 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 LARP7P2-201ENST00000575306 125 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 BNIP3P9-201ENST00000603714 553 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.35□□□□□ -2.47
PRKDCP78527 MIR1246-201ENST00000636535 73 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 RNA5SP517-201ENST00000364724 117 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 MIR548B-201ENST00000385247 97 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 RNU6-747P-201ENST00000390928 104 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 RNU6-241P-201ENST00000391148 104 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.35□□□□□ -2.47
PRKDCP78527 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
PRKDCP78527 MTND4LP26-201ENST00000518144 282 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.35□□□□□ -2.47
PRKDCP78527 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.35□□□□□ -2.47
PRKDCP78527 MIR4753-201ENST00000585119 83 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 AP000676.3-201ENST00000623299 569 ntBASIC-0.35□□□□□ -2.47
PRKDCP78527 SNORD116-20-201ENST00000384529 92 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 MIR653-201ENST00000385279 96 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 FCF1P10-201ENST00000407590 479 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 AC078795.3-201ENST00000602913 472 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 AC008250.2-201ENST00000615261 205 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 RNU4-16P-201ENST00000364737 141 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 MIR1827-201ENST00000408549 66 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 AL133396.1-201ENST00000432048 687 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 CECR9-201ENST00000453421 199 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 RNU1-142P-201ENST00000516682 145 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 RNU6-714P-201ENST00000516963 103 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 AC024405.2-202ENST00000532731 184 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 AC090049.2-201ENST00000550377 109 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 AL596327.1-201ENST00000603629 213 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 AL662814.1-201ENST00000617364 121 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 RNU6-252P-201ENST00000363232 107 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 AL365338.1-201ENST00000422282 858 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.36□□□□□ -2.47
PRKDCP78527 RNU6-703P-201ENST00000516946 107 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 AC027288.2-201ENST00000553028 243 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 AC011195.1-201ENST00000578177 177 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.36□□□□□ -2.47
PRKDCP78527 AC093875.1-201ENST00000623688 504 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.36□□□□□ -2.47
PRKDCP78527 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 RNU6-534P-201ENST00000364877 106 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 RNY3P14-201ENST00000384309 102 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 RNU6-166P-201ENST00000384371 107 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.36□□□□□ -2.47
PRKDCP78527 AL133217.1-201ENST00000450980 425 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.36□□□□□ -2.47
PRKDCP78527 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.36□□□□□ -2.47
PRKDCP78527 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.36□□□□□ -2.47
PRKDCP78527 MIR8054-201ENST00000620877 86 ntBASIC-0.36□□□□□ -2.47
PRKDCP78527 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 SNORA8.2-201ENST00000384372 139 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 MTCO3P1-205ENST00000422088 832 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 TPT1P7-201ENST00000458300 517 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.37□□□□□ -2.47
PRKDCP78527 RNU6-848P-201ENST00000515948 107 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 RNU6-617P-201ENST00000516147 107 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 RNU6-473P-201ENST00000516164 107 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 AC023538.1-201ENST00000534576 736 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 RNU6-94P-201ENST00000607728 107 ntBASIC-0.37□□□□□ -2.47
PRKDCP78527 SNORA18.1-201ENST00000363418 128 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms