Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 SNORD114-28-201ENST00000363610 72 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.01□□□□□ -2.41
ABCA4P78363 ELOCP17-201ENST00000414751 326 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 HIGD1AP15-201ENST00000416198 280 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.01□□□□□ -2.41
ABCA4P78363 AL122001.1-201ENST00000457027 370 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 AC022447.4-201ENST00000504053 364 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 AC113410.1-201ENST00000505029 247 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
ABCA4P78363 MTND4LP26-201ENST00000518144 282 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 AC093027.1-201ENST00000546698 429 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.01□□□□□ -2.41
ABCA4P78363 MIR4764-201ENST00000580680 88 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 AL355297.3-201ENST00000604082 446 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 RNU4-5P-201ENST00000607255 135 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.01□□□□□ -2.41
ABCA4P78363 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.01□□□□□ -2.41
ABCA4P78363 AL359697.1-201ENST00000624879 587 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 AL157786.1-207ENST00000627771 695 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 Y_RNA.65-201ENST00000362846 100 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 RNU6-1244P-201ENST00000363614 108 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 MIR660-201ENST00000385235 97 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 AC243964.1-201ENST00000441814 261 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.01□□□□□ -2.41
ABCA4P78363 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.01□□□□□ -2.41
ABCA4P78363 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.01□□□□□ -2.41
ABCA4P78363 HMGB1P29-201ENST00000505659 499 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 AC091885.1-201ENST00000506658 268 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 SCARNA8-201ENST00000515924 131 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 RNU6-782P-201ENST00000516852 104 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 MIR4742-201ENST00000581069 85 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 MIR4753-201ENST00000585119 83 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.01□□□□□ -2.41
ABCA4P78363 TCL6_2.1-201ENST00000615162 119 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 Y_RNA.804-201ENST00000615262 101 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 AC068792.1-201ENST00000621354 417 ntBASIC0.01□□□□□ -2.41
ABCA4P78363 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.01□□□□□ -2.41
ABCA4P78363 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
ABCA4P78363 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
ABCA4P78363 MIRLET7D-201ENST00000362263 87 ntBASIC0□□□□□ -2.41
ABCA4P78363 RNU6-527P-201ENST00000363425 104 ntBASIC0□□□□□ -2.41
ABCA4P78363 RNU6-756P-201ENST00000383997 107 ntBASIC0□□□□□ -2.41
ABCA4P78363 MIR520F-201ENST00000384824 87 ntBASIC0□□□□□ -2.41
ABCA4P78363 TRIM60P10Y-201ENST00000425589 751 ntBASIC0□□□□□ -2.41
ABCA4P78363 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0□□□□□ -2.41
ABCA4P78363 MTND5P16-201ENST00000460269 1703 ntBASIC0□□□□□ -2.41
ABCA4P78363 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0□□□□□ -2.41
ABCA4P78363 AC113347.3-201ENST00000509113 148 ntBASIC0□□□□□ -2.41
ABCA4P78363 AP002001.1-203ENST00000534002 267 ntBASIC0□□□□□ -2.41
ABCA4P78363 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0□□□□□ -2.41
ABCA4P78363 Z99497.2-201ENST00000603634 310 ntBASIC0□□□□□ -2.41
ABCA4P78363 AC005520.5-201ENST00000613926 164 ntBASIC0□□□□□ -2.41
ABCA4P78363 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0□□□□□ -2.41
ABCA4P78363 AL162376.1-201ENST00000624117 175 ntBASIC0□□□□□ -2.41
ABCA4P78363 U3.9-201ENST00000363823 204 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 MIR573-201ENST00000384964 99 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
ABCA4P78363 AC074290.1-201ENST00000448883 135 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.01□□□□□ -2.41
ABCA4P78363 AC093850.1-201ENST00000454121 251 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 AC116347.2-201ENST00000514912 523 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 RNU6-917P-201ENST00000516294 104 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 MIR4432-201ENST00000581823 84 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 AC091805.2-201ENST00000603848 235 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 AC063944.3-201ENST00000609969 533 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 RNU6-199P-201ENST00000362954 107 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 RNU6-511P-201ENST00000363496 107 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 MIR558-201ENST00000384920 94 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 MTND4LP11-201ENST00000422184 280 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.01□□□□□ -2.41
ABCA4P78363 STAG3L5P-204ENST00000443759 179 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.01□□□□□ -2.41
ABCA4P78363 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.01□□□□□ -2.41
ABCA4P78363 RNU7-51P-201ENST00000516560 62 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 RNU2-46P-201ENST00000517038 113 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.01□□□□□ -2.41
ABCA4P78363 AK6P2-201ENST00000549020 471 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 AC087883.1-201ENST00000551882 391 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 MIR378F-201ENST00000578143 78 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 AL391903.3-201ENST00000612158 163 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 AC007014.2-201ENST00000615581 479 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 MIR6740-201ENST00000618268 113 ntBASIC-0.01□□□□□ -2.41
ABCA4P78363 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.01□□□□□ -2.41
ABCA4P78363 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AP000568.1-201ENST00000282964 442 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
ABCA4P78363 RNA5SP201-201ENST00000410316 124 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AL663109.1-201ENST00000411498 844 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AL590135.1-201ENST00000422215 156 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AC019205.3-201ENST00000424573 156 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AC244098.3-201ENST00000424803 96 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AC016700.2-201ENST00000446011 156 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AF186996.7-201ENST00000492781 209 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AC015911.1-201ENST00000495111 156 ntBASIC-0.02□□□□□ -2.41
ABCA4P78363 AC010469.2-201ENST00000496412 480 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms